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L3_079_000M1_scaffold_712

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_712_1
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(3..284)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PT57_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL69794.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
L3_079_000M1_scaffold_712_2
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(416..760)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IA46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48351.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
FOG: HPt domain
L3_079_000M1_scaffold_712_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(779..2656)
DNA (1878bp) protein (626aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MB80_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EOS65127.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_079_000M1_scaffold_712_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3279..3614)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N7I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS79245.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
putative Xre family DNA-binding protein
L3_079_000M1_scaffold_712_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3768..3980
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS13121.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_079_000M1_scaffold_712_6
unknown

Not on your lists

4062..4319
DNA (258bp) protein (86aa)

This feature has no annotations

L3_079_000M1_scaffold_712_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4397..4987
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74709.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4965..5225
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74708.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_9
unknown

Not on your lists

comp(5418..5804)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_079_000M1_scaffold_712_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5963..7945
DNA (1983bp) protein (661aa)
Mu transposase domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRI1_9FIRM
Mu transposase domain protein {ECO:0000313|EMBL:EFB74707.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transposase-like Mu
L3_079_000M1_scaffold_712_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7929..8894
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74706.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative ATPase, transposase-like protein
L3_079_000M1_scaffold_712_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8905..9279
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74705.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9372..9593
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74704.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9594..10091
DNA (498bp) protein (166aa)
Putative bacteriophage Mu Gam like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH7_9FIRM
Putative bacteriophage Mu Gam like protein {ECO:0000313|EMBL:EFB74703.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
prophage MuMc02, host-nuclease inhibitor protein
L3_079_000M1_scaffold_712_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10195..10668
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74702.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_712_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10674..10988
DNA (315bp) protein (105aa)
Mor transcription activator family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH5_9FIRM
Mor transcription activator family protein {ECO:0000313|EMBL:EFB74701.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
possible positive regulator of late transcription
L3_079_000M1_scaffold_712_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11095..11490
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74700.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_712_18
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11490..11828
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74699.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11831..12403
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74698.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_712_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12400..12957
DNA (558bp) protein (186aa)
Transcription termination/antitermination factor NusG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH1_9FIRM
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EFB74697.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
NGN domain-containing protein
L3_079_000M1_scaffold_712_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13191..13493
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74696.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13480..14736
DNA (1257bp) protein (419aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG9_9FIRM
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EFB74695.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PBSX family phage terminase large subunit
L3_079_000M1_scaffold_712_23
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14738..14947
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74694.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_712_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15055..16461
DNA (1407bp) protein (469aa)
Putative phage minor capsid protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG7_9FIRM
Putative phage minor capsid protein {ECO:0000313|EMBL:EFB74693.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative portal protein
L3_079_000M1_scaffold_712_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16468..18165
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74692.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_712_26
unknown

Not on your lists

18131..18451
DNA (321bp) protein (107aa)

This feature has no annotations

L3_079_000M1_scaffold_712_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18810..19376
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74691.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phage minor structural GP20 family protein
L3_079_000M1_scaffold_712_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19390..20295
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74690.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_712_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20307..20678
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74689.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_712_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20680..21036
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74688.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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