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L3_079_000M1_scaffold_766

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_766_1
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(2..352)
DNA (351bp) protein (117aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH67173.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_079_000M1_scaffold_766_2
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1066..1479)
DNA (414bp) protein (138aa)
Helix-turn-helix n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZJM1_9ACTN
Helix-turn-helix {ECO:0000313|EMBL:CDD43604.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
Helix-turn-helix.
L3_079_000M1_scaffold_766_3
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1620..1823
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Actinobacteria RepID=A4E8I0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD43603.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
hypothetical protein
L3_079_000M1_scaffold_766_4
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1825..2895
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YPQ8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85782.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
Site-specific recombinase XerD
L3_079_000M1_scaffold_766_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2901..3326
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZRC7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KEY22027.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L3_079_000M1_scaffold_766_6
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3410..3661)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0ZE44_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85780.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
L3_079_000M1_scaffold_766_7
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4202..4573
DNA (372bp) protein (124aa)
Predicted endonuclease distantly related to archaeal Holliday junction resolvase n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EB86_9ACTN
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
Predicted endonuclease distantly related to archaeal Holliday junction resolvase {ECO:0000313|EMBL:CBL04983.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_079_000M1_scaffold_766_8
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4777..5541
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQN1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85778.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
ATPases involved in chromosome partitioning
L3_079_000M1_scaffold_766_9
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5528..6484
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YPQ6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85777.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
plasmid stablization protein ParB
L3_079_000M1_scaffold_766_10
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6696..7142
DNA (447bp) protein (149aa)
Ribbon-helix-helix protein, copG family n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EB84_9ACTN
Ribbon-helix-helix protein, copG family.
Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:CBL04981.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_079_000M1_scaffold_766_11
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7130..8401
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0ZE42_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85775.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
Relaxase/Mobilisation nuclease domain.
L3_079_000M1_scaffold_766_12
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8398..8952
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6EB82_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04979.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L3_079_000M1_scaffold_766_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9244..10029)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7X4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74239.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L3_079_000M1_scaffold_766_14
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10079..12016)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81847.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_079_000M1_scaffold_766_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12267..12998)
DNA (732bp) protein (244aa)
Putative sortase, SrtB family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8G0_9ACTN
Putative sortase, SrtB family {ECO:0000313|EMBL:EBA40176.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_766_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13071..15812)
DNA (2742bp) protein (914aa)
Cna protein B-type domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F9_9ACTN
Cna protein B-type domain protein {ECO:0000313|EMBL:EBA40175.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_766_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15825..16283)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40174.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DNA gyrase
L3_079_000M1_scaffold_766_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16393..17394)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40173.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
TrbL/VirB6 plasmid conjugal transfer protein
L3_079_000M1_scaffold_766_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17397..18116)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40172.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_766_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18126..19727)
DNA (1602bp) protein (534aa)
NlpC/P60 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F5_9ACTN
NlpC/P60 family protein {ECO:0000313|EMBL:EBA40171.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hydrolase Nlp/P60
L3_079_000M1_scaffold_766_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19730..22207)
DNA (2478bp) protein (826aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40170.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Domain of unknown function DUF87.
L3_079_000M1_scaffold_766_22
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22176..22601)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40168.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_766_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22614..22829)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Coriobacteriaceae RepID=A4E8F1_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EBA40167.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000M1_scaffold_766_24
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22914..24731)
DNA (1818bp) protein (606aa)
TraG/TraD family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8F0_9ACTN
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:KFI95947.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
conjugal transfer protein TraG
L3_079_000M1_scaffold_766_25
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24728..25279)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8E9_9ACTN
Putative DNA repair protein RecN {ECO:0000313|EMBL:KFI95948.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_079_000M1_scaffold_766_26
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25336..25869)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8E8_9ACTN
Dipeptide/oligopeptide/nickel ABC transporter periplasmic protein {ECO:0000313|EMBL:KFI95949.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
peptide ABC transporter substrate-binding protein
L3_079_000M1_scaffold_766_27
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26071..26859)
DNA (789bp) protein (263aa)
IstB-like ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8E7_9ACTN
IstB domain-containing protein ATP-binding protein {ECO:0000313|EMBL:KFI95950.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
phage DNA replication protein
L3_079_000M1_scaffold_766_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26874..27389)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8E6_9ACTN
Putative transcriptional regulator {ECO:0000313|EMBL:KFI95951.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
hypothetical protein
L3_079_000M1_scaffold_766_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27394..27642)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8E4_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EBA40160.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000M1_scaffold_766_30
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(27626..27724)
DNA (99bp) protein (33aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH94652.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Displaying items 1-30 of 83 in total

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