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L3_079_000M1_scaffold_780

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_780_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..99
DNA (99bp) protein (33aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Succinispira mobilis RepID=UPI00037862EB
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L3_079_000M1_scaffold_780_2
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


265..576
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9U7_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S10
L3_079_000M1_scaffold_780_3
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


592..1233
DNA (642bp) protein (214aa)
50S ribosomal protein L3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INW2_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L3
L3_079_000M1_scaffold_780_4
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


1266..1850
DNA (585bp) protein (195aa)
50S ribosomal protein L4 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICY0_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L4
L3_079_000M1_scaffold_780_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


1850..2140
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKW5_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L25
L3_079_000M1_scaffold_780_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


2167..2997
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IA20_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L2
L3_079_000M1_scaffold_780_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3028..3303
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9U3_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S19
L3_079_000M1_scaffold_780_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3325..3657
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INV8_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rplV; 50S ribosomal protein L22
L3_079_000M1_scaffold_780_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


3685..4353
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICX6_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S3
L3_079_000M1_scaffold_780_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


4358..4810
DNA (453bp) protein (151aa)
50S ribosomal protein L16 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKW3_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L16
L3_079_000M1_scaffold_780_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


4810..5004
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IA18_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L29
L3_079_000M1_scaffold_780_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5039..5299
DNA (261bp) protein (87aa)
30S ribosomal protein S17 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9T9_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rpsQ; 30S ribosomal protein S17
L3_079_000M1_scaffold_780_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5340..5708
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INV6_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L14
L3_079_000M1_scaffold_780_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


5745..6074
DNA (330bp) protein (110aa)
50S ribosomal protein L24 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICX0_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L24
L3_079_000M1_scaffold_780_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


6101..6646
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKV8_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L5
L3_079_000M1_scaffold_780_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


6880..7278
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IA14_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S8
L3_079_000M1_scaffold_780_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


7306..7854
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9T6_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rplF; 50S ribosomal protein L6
L3_079_000M1_scaffold_780_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


7880..8242
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INV3_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L18
L3_079_000M1_scaffold_780_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8260..8760
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICW6_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S5
L3_079_000M1_scaffold_780_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8773..8958
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKV5_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L30
L3_079_000M1_scaffold_780_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8979..9419
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IA10_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L15
L3_079_000M1_scaffold_780_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


9420..10676
DNA (1257bp) protein (419aa)
Protein translocase subunit SecY n=2 Tax=Bacteria RepID=R6J9T2_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Protein translocase subunit SecY
L3_079_000M1_scaffold_780_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10690..11340
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Adenylate kinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INV0_9FIRM
adenylate kinase
L3_079_000M1_scaffold_780_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11355..11573
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICW3_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Translation initiation factor IF-1
L3_079_000M1_scaffold_780_25
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11603..11716
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=7 Tax=Selenomonadales RepID=A1HQN6_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
50S ribosomal protein L36
L3_079_000M1_scaffold_780_26
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


11735..12103
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IA08_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S13
L3_079_000M1_scaffold_780_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


12126..12518
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J9S7_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
30S ribosomal protein S11
L3_079_000M1_scaffold_780_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


12542..13168
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6INU6_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rpsD; 30S ribosomal protein S4
L3_079_000M1_scaffold_780_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13237..14205
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
rpoA; DNA-directed RNA polymerase (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ICV9_9FIRM
L3_079_000M1_scaffold_780_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


14224..14562
DNA (339bp) protein (113aa)
50S ribosomal protein L17 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IKU9_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
50S ribosomal protein L17
Displaying items 1-30 of 54 in total

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