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L3_079_000M1_scaffold_871

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_871_1
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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114..1406
DNA (1293bp) protein (431aa)
MATE efflux family protein n=4 Tax=root RepID=C6ZB31_9BACE
BexA protein {ECO:0000313|EMBL:EFV68848.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
cation effux pump BexA
L3_079_000M1_scaffold_871_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1521..2105
DNA (585bp) protein (195aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6KY32_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38346.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2123..2893)
DNA (771bp) protein (257aa)
Transcriptional regulator n=2 Tax=Bacteroides vulgatus RepID=A6KY33_BACV8
transcriptional regulator
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KDS27800.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000M1_scaffold_871_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2944..4551)
DNA (1608bp) protein (536aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Glycoside hydrolase family 27 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KY34_BACV8
glycoside hydrolase
L3_079_000M1_scaffold_871_5
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5503..6582)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IBR4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14862.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_079_000M1_scaffold_871_6
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6816..7853)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=root RepID=I8ZU92_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF17560.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_079_000M1_scaffold_871_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7886..9328)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=2 Tax=root RepID=I9U8Q6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78701.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_000M1_scaffold_871_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9359..12655)
DNA (3297bp) protein (1099aa)
SusC/RagA family TonB-linked outer membrane protein n=3 Tax=root RepID=I8ZT19_BACVU
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY78700.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_000M1_scaffold_871_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12812..13810)
DNA (999bp) protein (333aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9IXU1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78699.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
anti-sigma factor
L3_079_000M1_scaffold_871_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13871..14461)
DNA (591bp) protein (197aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroides RepID=A6KYC7_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17556.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_871_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15357..17513)
DNA (2157bp) protein (719aa)
Alpha-galactosidase n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9H3E9_BACVU
Alpha-galactosidase {ECO:0000313|EMBL:EOR98546.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
alpha-glycosidase
L3_079_000M1_scaffold_871_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17612..18508
DNA (897bp) protein (299aa)
Transcriptional regulator n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYC9_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR38443.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_13
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18521..20581)
DNA (2061bp) protein (687aa)
Sialate O-acetylesterase n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IBX6_9BACE
Sialate O-acetylesterase {ECO:0000313|EMBL:EOS14854.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
9-O-acetylesterase
L3_079_000M1_scaffold_871_14
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20584..22863)
DNA (2280bp) protein (760aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IJW9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14853.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
glycoside hydrolase family protein
L3_079_000M1_scaffold_871_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22875..25817)
DNA (2943bp) protein (981aa)
Glycoside hydrolase family 2, candidate beta-glycosidase contains a CBM35 module n=2 Tax=Bacteroides RepID=A6KYD4_BACV8
beta-glycosidase
Glycoside hydrolase family 2 candidate beta-glycosidase contains a CBM35 module {ECO:0000313|EMBL:CDF18933.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_871_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25847..26869)
DNA (1023bp) protein (341aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Aldose 1-epimerase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3L8_9BACE
aldose 1-epimerase
L3_079_000M1_scaffold_871_17
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26959..28578)
DNA (1620bp) protein (540aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P1P2_9BACE
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CDF18931.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_079_000M1_scaffold_871_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28624..31677)
DNA (3054bp) protein (1018aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYD7_BACV8
hypothetical protein
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR38451.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31717..33744)
DNA (2028bp) protein (676aa)
Alpha-galactosidase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYD8_BACV8
alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:ABR38452.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33948..37985)
DNA (4038bp) protein (1346aa)
Two-component system sensor histidine kinase/response regulator, hybrid n=2 Tax=Bacteroides RepID=A6KYD9_BACV8
Two-component system sensor histidine kinase/response regulator hybrid {ECO:0000313|EMBL:CDF18928.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_079_000M1_scaffold_871_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38069..40054)
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3L2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF18927.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_079_000M1_scaffold_871_22
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40051..43392)
DNA (3342bp) protein (1114aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IBG5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS14846.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
hypothetical protein
L3_079_000M1_scaffold_871_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43405..44790)
DNA (1386bp) protein (462aa)
Xylose/H+ symporter n=2 Tax=Bacteroides RepID=A6KYE1_BACV8
xylose/H+ symporter
Xylose/H+ symporter {ECO:0000313|EMBL:ABR38455.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_24
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44985..47387)
DNA (2403bp) protein (801aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3PXU2_9BACE
glycoside hydrolase family 95
Putative uncharacterized protein {ECO:0000313|EMBL:EEB22737.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_079_000M1_scaffold_871_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47562..48797)
DNA (1236bp) protein (412aa)
Glycoside hydrolase family 92 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYE5_BACV8
glycoside hydrolase
Glycoside hydrolase family 92 {ECO:0000313|EMBL:ABR38459.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48894..49778)
DNA (885bp) protein (295aa)
Glycoside hydrolase family 92 n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYE5_BACV8
glycoside hydrolase
Glycoside hydrolase family 92 {ECO:0000313|EMBL:ABR38459.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_871_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50094..52328
DNA (2235bp) protein (745aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_40A RepID=E5UPS6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV69002.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_079_000M1_scaffold_871_28
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52292..53302
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U8Q1_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF19206.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_871_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53451..53924)
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=R9HBM2_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98549.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
Displaying 29 items

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