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L3_079_000M1_scaffold_952

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_952_1
unknown

Not on your lists

comp(2..223)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_079_000M1_scaffold_952_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(416..1240)
DNA (825bp) protein (275aa)
pantothenate kinase (EC:2.7.1.33)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6Y3_BACV8
Pantothenate kinase {ECO:0000313|EMBL:EIY75691.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_952_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1318..3234)
DNA (1917bp) protein (639aa)
Sialic acid-specific 9-O-acetylesterase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6Y2_BACV8
Sialic acid-specific 9-O-acetylesterase {ECO:0000313|EMBL:ABR41446.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
sialic acid-specific 9-O-acetylesterase
L3_079_000M1_scaffold_952_4
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3272..3889)
DNA (618bp) protein (206aa)
PAP2 family protein n=6 Tax=Bacteroides RepID=C6ZBJ3_9BACE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDF18880.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_952_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3996..7985)
DNA (3990bp) protein (1330aa)
Two-component system sensor histidine kinase/response regulator, hybrid n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6Y0_BACV8
Two-component system sensor histidine kinase/response regulator, hybrid {ECO:0000313|EMBL:ABR41444.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
two-component system sensor histidine kinase/response regulator, hybrid
L3_079_000M1_scaffold_952_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8282..9037
DNA (756bp) protein (252aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6X9_BACV8
NigD-like family protein {ECO:0000313|EMBL:KDS31136.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_079_000M1_scaffold_952_7

Not on your lists

comp(9112..9477)
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB n=9 Tax=root RepID=CRCB_BACV8
camphor resistance protein CrcB
Camphor resistance CrcB protein {ECO:0000313|EMBL:EKC43843.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_000M1_scaffold_952_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9576..10982
DNA (1407bp) protein (469aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Amidophosphoribosyltransferase n=8 Tax=root RepID=A6L6X7_BACV8
amidophosphoribosyltransferase
L3_079_000M1_scaffold_952_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11090..12310
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=4 Tax=Bacteroides RepID=D4V714_BACVU
L3_079_000M1_scaffold_952_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12346..13095
DNA (750bp) protein (250aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Aminomethyltransferase n=3 Tax=Bacteroides RepID=GCST_BACV8
L3_079_000M1_scaffold_952_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13092..13340
DNA (249bp) protein (83aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aminomethyltransferase n=3 Tax=Bacteroides RepID=C6ZBJ9_9BACE
L3_079_000M1_scaffold_952_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13253..13435)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLX9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04791.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_952_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13546..15813
DNA (2268bp) protein (756aa)
TrkA-C domain protein n=4 Tax=Bacteroides vulgatus RepID=D4V716_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY75682.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Na+/H+ antiporter
L3_079_000M1_scaffold_952_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15838..16263
DNA (426bp) protein (142aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L6X3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18888.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_952_15
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16354..16782)
DNA (429bp) protein (143aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6X2_BACV8
hypothetical protein
S4 domain-containing protein {ECO:0000313|EMBL:EFV67911.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_952_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16782..17345)
DNA (564bp) protein (188aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Peptidyl-tRNA hydrolase n=8 Tax=root RepID=PTH_BACV8
L3_079_000M1_scaffold_952_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17370..17966)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=6 Tax=Bacteroides RepID=RL25_BACV8
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_952_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18147..18530)
DNA (384bp) protein (128aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L6W9_BACV8
DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18892.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_952_19
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18726..19652
DNA (927bp) protein (309aa)
Transcription antitermination factor NusB n=14 Tax=Bacteroides RepID=C3Q7P0_9BACE
nitrogen utilization protein
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_952_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19709..20023
DNA (315bp) protein (105aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L6W7_BACV8
preprotein translocase subunit YajC
Uncharacterized protein {ECO:0000313|EMBL:CDF18894.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_952_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20037..21050
DNA (1014bp) protein (338aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L6W6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY75674.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_952_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21043..21639
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Dephospho-CoA kinase n=3 Tax=Bacteroides RepID=D4V6Y9_BACVU
dephospho-CoA kinase
L3_079_000M1_scaffold_952_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21706..22146
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A6L6W4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS55157.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_952_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22970..23083
DNA (114bp) protein (38aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS31118.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000M1_scaffold_952_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23260..25848)
DNA (2589bp) protein (863aa)
Endopeptidase Clp ATP-binding chain B n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6W2_BACV8
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
endopeptidase Clp ATP-binding subunit B
L3_079_000M1_scaffold_952_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26123..26704
DNA (582bp) protein (194aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6W1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY75617.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_952_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26717..27613
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=8 Tax=root RepID=C6Z7X8_9BACE
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY75616.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_952_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27702..28688
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L6V9_BACV8
hypothetical protein
Conserved hypothetical 698 family protein {ECO:0000313|EMBL:KDS55149.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_952_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28780..30069)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L6V8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41422.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_952_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30147..30629)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9U1B3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS55147.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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