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L3_079_000M1_scaffold_958

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_958_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..163
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QN18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64295.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

181..1056
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R471_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64294.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_958_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1053..1193
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QL93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64293.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1239..2117
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R551_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64292.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2371..3099
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R5Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64291.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4231..6228
DNA (1998bp) protein (666aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QL87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64288.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6466..7395)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=2 Tax=Oscillibacter RepID=U2SDN8_9FIRM
L3_079_000M1_scaffold_958_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7409..7732)
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Oscillibacter RepID=U2R5Z1_9FIRM
Thioredoxin {ECO:0000313|EMBL:ERK64286.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
thioredoxin
L3_079_000M1_scaffold_958_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7893..8549
DNA (657bp) protein (219aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Oscillibacter RepID=U2QN07_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ERK64285.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative transcriptional regulator
L3_079_000M1_scaffold_958_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8569..9144)
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QL82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64284.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9141..9350)
DNA (210bp) protein (70aa)
4Fe-4S binding domain protein n=2 Tax=Oscillibacter RepID=U2R542_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERK64283.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
4Fe-4S ferredoxin
L3_079_000M1_scaffold_958_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9609..10016
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2SDN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64282.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_958_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10222..10794
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R5Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64281.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10791..11201
DNA (411bp) protein (137aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=2 Tax=Oscillibacter RepID=U2QN00_9FIRM
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_958_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11218..11676
DNA (459bp) protein (153aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Phosphodiesterase family protein n=2 Tax=Oscillibacter RepID=U2QL77_9FIRM
putative hydrolase
L3_079_000M1_scaffold_958_16
unknown

Not on your lists

comp(11592..11843)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_079_000M1_scaffold_958_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12060..15104)
DNA (3045bp) protein (1015aa)
Type III restriction enzyme, res subunit n=2 Tax=Oscillibacter RepID=U2QLJ9_9FIRM
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:ERK64402.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_958_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15197..17155)
DNA (1959bp) protein (653aa)
type III restriction-modification system methylation subunit (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=2 Tax=Oscillibacter RepID=U2R5E4_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:ERK64401.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000M1_scaffold_958_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17394..18293
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35361.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_079_000M1_scaffold_958_20

Not on your lists

comp(18340..18735)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002D38557
Marine sediment metagenome DNA, contig: S01H1_C00378 {ECO:0000313|EMBL:GAF76400.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
methylmalonyl-CoA epimerase
L3_079_000M1_scaffold_958_21
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(18759..20033)
DNA (1275bp) protein (425aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5ECF6_AMICL
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADE56238.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
L3_079_000M1_scaffold_958_22
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20033..20518)
DNA (486bp) protein (162aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRN6_9FIRM
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:ERI78813.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
C4-dicarboxylate transport system permease small protein
L3_079_000M1_scaffold_958_23
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20610..21641)
DNA (1032bp) protein (344aa)
C4-dicarboxylate transport system substrate-binding protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WAK0_BACSK
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL37588.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
C4-dicarboxylate transport system substrate-binding protein
L3_079_000M1_scaffold_958_24
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21679..22698)
DNA (1020bp) protein (340aa)
sorbitol dehydrogenase (EC:1.1.1.14)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AW61_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
L3_079_000M1_scaffold_958_25
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(22727..23587)
DNA (861bp) protein (287aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS04_9BACT
Tax=RBG_16_KB1_OP1_55_9_curated
L3_079_000M1_scaffold_958_26
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23637..24617)
DNA (981bp) protein (327aa)
quinone oxidoreductase n=1 Tax=Paenibacillus elgii RepID=UPI000248DFA2
Quinone oxidoreductase {ECO:0000313|EMBL:KEQ24271.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
zinc-binding dehydrogenase family oxidoreductase
L3_079_000M1_scaffold_958_27
unknown

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24926..25981
DNA (1056bp) protein (352aa)

This feature has no annotations

L3_079_000M1_scaffold_958_28
unknown

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25968..26528
DNA (561bp) protein (187aa)

This feature has no annotations

L3_079_000M1_scaffold_958_29
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26479..27867
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1385511 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
Two-component sensor histidine kinase n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9K691_BACHD
two-component sensor histidine kinase
L3_079_000M1_scaffold_958_30
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27849..29282
DNA (1434bp) protein (478aa)
Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I4R8_9BACL
AraC family transcriptional regulator {ECO:0000313|EMBL:KIL35084.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
two component transcriptional regulator
Displaying items 1-30 of 42 in total

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