ggKbase home page

L3_079_000M1_scaffold_975_30

Organism: L3_079_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(21821..22270)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJS6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 160.0
  • Bit_score: 188
  • Evalue 4.90e-45
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 160.0
  • Bit_score: 188
  • Evalue 6.90e-45
single-strand binding protein similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 160.0
  • Bit_score: 183
  • Evalue 3.40e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 450
ATGCTGAATATCTGTGCATTGCAGGGCCATCTGGCCCGGGACCCGGAGCTGCGGCAGACCAACACGGGCAAGCAGGTGGCGACATTCACCCTGGCCGTGGACCGTGGGCGCAAGGACGCCAACGGCAAGAGCGTGGCGGACTGGATTCCCGTCATTGCATGGGAGCGTGCCGCCGAGTTTGCCTATAAATGGCTCAATAAGGGCCAGATGGTGGCGGTGGATGGACGGCTCCAGAGCCGCACCTACACAGCCAAGGACGGCACCAACCGCACCGTGCTGGAGGTTGTGGCCAATAACATCAACTTCTGCGGCAGCAAGGCGGACAACGCCGCCCAGGGCTCCCCTGCCCCGGCGGGCCAGCCCCGCGTCACCGGTTCGGCACCGGCCTACAATCAGGGGCCGGGTGACGACTTCGCCATGATCGAGGATGAGGGCGACCTCCCCTTTTAA
PROTEIN sequence
Length: 150
MLNICALQGHLARDPELRQTNTGKQVATFTLAVDRGRKDANGKSVADWIPVIAWERAAEFAYKWLNKGQMVAVDGRLQSRTYTAKDGTNRTVLEVVANNINFCGSKADNAAQGSPAPAGQPRVTGSAPAYNQGPGDDFAMIEDEGDLPF*