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L3_079_000M1_scaffold_975

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_975_1
unknown

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_079_000M1_scaffold_975_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(337..1017)
DNA (681bp) protein (227aa)
Reverse transcriptase (RNA-dependent DNA polymerase) id=4235834 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Retron-type reverse transcriptase
Tax=GWF2_Clostridiales_38_85_curated
L3_079_000M1_scaffold_975_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1014..1592)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF41171.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_079_000M1_scaffold_975_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1603..2877)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74677.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phage structural protein, truncation
L3_079_000M1_scaffold_975_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2883..3965)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74678.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L3_079_000M1_scaffold_975_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3958..4830)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74679.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_975_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4846..7029)
DNA (2184bp) protein (728aa)
Phage tail tape measure protein, TP901 family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNP7_9FIRM
Phage tail tape measure protein, TP901 family {ECO:0000313|EMBL:EFQ05140.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
phage tail tape measure protein, TP901 family
L3_079_000M1_scaffold_975_8
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7035..7397)
DNA (363bp) protein (121aa)
Uncharacterized protein n=7 Tax=Streptococcus pyogenes RepID=T5E531_STRPY
hypothetical protein
Phage protein {ECO:0000313|EMBL:KED05287.1}; TaxID=1051981 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. ruminatorum CECT 5772.;"
L3_079_000M1_scaffold_975_9
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7409..7672)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2RW76_9BACL
Uncharacterized protein {ECO:0000313|EMBL:ERK57823.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;"
pp150; phage protein
L3_079_000M1_scaffold_975_10
Enterococcus cecorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7672..8229)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Enterococcus cecorum DSM 20682 = ATCC 43198 RepID=S1R3E3_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:ESK60499.1}; TaxID=1121864 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus cecorum DSM 20682 = ATCC 43198.;"
major tail protein
L3_079_000M1_scaffold_975_11
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8380..8715)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Streptococcus suis T15 RepID=U5UH51_STRSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ23754.1}; TaxID=1340847 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis T15.;"
L3_079_000M1_scaffold_975_12

Not on your lists

comp(8712..8948)
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=root RepID=M1NS01_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGF87551.1}; TaxID=1289599 species="Viruses; unclassified phages.;" source="Streptococcus phage phi891591.;"
hypothetical protein
L3_079_000M1_scaffold_975_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8941..9273)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07781.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
phage protein
L3_079_000M1_scaffold_975_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9270..9638)
DNA (369bp) protein (123aa)
Phage protein Gp19/Gp15/Gp42 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGA8_9FIRM
Phage protein Gp19/Gp15/Gp42 {ECO:0000313|EMBL:EFQ07780.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_975_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9650..10516)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05149.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_000M1_scaffold_975_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10617..11165)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05150.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage minor structural protein GP20.
L3_079_000M1_scaffold_975_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11315..12022)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07033.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_975_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11964..13403)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07032.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage portal protein, SPP1 Gp6-like.
L3_079_000M1_scaffold_975_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13417..14814)
DNA (1398bp) protein (466aa)
Putative phage terminase, large subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIH3_9FIRM
Putative phage terminase, large subunit {ECO:0000313|EMBL:EFQ07031.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage terminase-like protein, large subunit
L3_079_000M1_scaffold_975_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14777..15025)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07030.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_079_000M1_scaffold_975_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15099..15467)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07029.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L3_079_000M1_scaffold_975_22
unknown

Not on your lists

comp(16205..16633)
DNA (429bp) protein (143aa)

This feature has no annotations

L3_079_000M1_scaffold_975_23
unknown

Not on your lists

comp(16630..16998)
DNA (369bp) protein (123aa)

This feature has no annotations

L3_079_000M1_scaffold_975_24
unknown

Not on your lists

comp(17023..17253)
DNA (231bp) protein (77aa)

This feature has no annotations

L3_079_000M1_scaffold_975_25
unknown

Not on your lists

comp(17268..17360)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_079_000M1_scaffold_975_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17366..18760)
DNA (1395bp) protein (465aa)
ParB-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNC3_9FIRM
ParB-like protein {ECO:0000313|EMBL:EFB76058.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_975_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18764..19543)
DNA (780bp) protein (260aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNC0_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFB76055.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Cobyrinic acid ac-diamide synthase
L3_079_000M1_scaffold_975_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19577..20899)
DNA (1323bp) protein (441aa)
DnaB-like helicase C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB9_9FIRM
DnaB-like helicase C-terminal domain protein {ECO:0000313|EMBL:EFB76054.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
replicative DNA helicase
L3_079_000M1_scaffold_975_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20908..21723)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76051.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_975_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21821..22270)
DNA (450bp) protein (150aa)
Single-stranded DNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJS6_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
single-strand binding protein
Displaying items 1-30 of 50 in total

View Taxonomy