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L3_079_000M1_scaffold_1195

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1195_1
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

421..711
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C5X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD72703.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_1195_2
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

742..936
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C3I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD72704.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_1195_3
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(1020..1313)
DNA (294bp) protein (98aa)
XRE family transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C429_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:CDD72705.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
XRE family transcriptional regulator
L3_079_000M1_scaffold_1195_4
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

1519..2943
DNA (1425bp) protein (475aa)
Putative D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C3J6_9FIRM
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:CDD72714.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Bacterial Ig-like domain (group 2)./Fibronectin type III domain.
L3_079_000M1_scaffold_1195_5
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(3015..3359)
DNA (345bp) protein (115aa)
Helix-turn-helix domain-containing protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C441_9FIRM
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CDD72715.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Helix-turn-helix.
L3_079_000M1_scaffold_1195_6
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

3511..4077
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD72717.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_1195_7
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4140..4736
DNA (597bp) protein (199aa)
LemA family protein n=2 Tax=Lachnospiraceae RepID=L1PXR2_9FIRM
LemA family protein {ECO:0000313|EMBL:EDS20336.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L3_079_000M1_scaffold_1195_8
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

4761..6689
DNA (1929bp) protein (643aa)
Predicted membrane protein (DUF2207) n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4M6_9FIRM
Predicted membrane protein (DUF2207) {ECO:0000313|EMBL:CDD72722.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Predicted membrane protein (DUF2207).
L3_079_000M1_scaffold_1195_9
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

6997..9657
DNA (2661bp) protein (887aa)
Plasma-membrane calcium-translocating P-type ATPase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4U6_9FIRM
Plasma-membrane calcium-translocating P-type ATPase {ECO:0000313|EMBL:CDD72990.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
plasma-membrane calcium-translocating P-type ATPase
L3_079_000M1_scaffold_1195_10
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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9693..9809
DNA (117bp) protein (39aa)
Glycerate kinase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4G5_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDD72991.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_1195_11
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

9806..10597
DNA (792bp) protein (264aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C5E6_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDD72992.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_1195_12
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

10844..12061
DNA (1218bp) protein (406aa)
ATPase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C6P6_9FIRM
ATPase {ECO:0000313|EMBL:CDD72993.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Predicted ATPase (AAA+ superfamily)
L3_079_000M1_scaffold_1195_13
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12275..13582
DNA (1308bp) protein (436aa)
Predicted ATPase (AAA+ superfamily) n=2 Tax=Clostridiales RepID=D4MUI6_9FIRM
Predicted ATPase (AAA+ superfamily)
Uncharacterized protein {ECO:0000313|EMBL:EDS20341.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_079_000M1_scaffold_1195_14
unknown

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13618..13806
DNA (189bp) protein (63aa)

This feature has no annotations

L3_079_000M1_scaffold_1195_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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13775..14635
DNA (861bp) protein (287aa)
Predicted SAM-dependent methyltransferases n=4 Tax=Clostridiales RepID=D4MUI7_9FIRM
Predicted SAM-dependent methyltransferases
Uncharacterized protein {ECO:0000313|EMBL:CDA33141.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_079_000M1_scaffold_1195_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14797..15810
DNA (1014bp) protein (338aa)
Rod shape-determining protein MreB n=5 Tax=Clostridiales RepID=D4MUI8_9FIRM
rod shape-determining protein MreB
MreB/Mbl protein {ECO:0000313|EMBL:EFV17077.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_079_000M1_scaffold_1195_17
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15890..18151
DNA (2262bp) protein (754aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=2 Tax=Lachnospiraceae RepID=L1Q7Y7_9FIRM
L3_079_000M1_scaffold_1195_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18266..18799
DNA (534bp) protein (178aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P4U2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY23731.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_079_000M1_scaffold_1195_19
unknown

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18897..19877
DNA (981bp) protein (327aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBL39057.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CBL39057.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Sugar kinases, ribokinase family n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MUJ1_9FIRM
L3_079_000M1_scaffold_1195_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19925..20095)
DNA (171bp) protein (57aa)
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (Chain I) n=5 Tax=Clostridiales RepID=D4MUJ2_9FIRM
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Ferredoxin {ECO:0000313|EMBL:EKY23729.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_079_000M1_scaffold_1195_21
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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20363..20569
DNA (207bp) protein (69aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6Z9_9FIRM
Domain of unknown function (DUF1858).
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:CDA33135.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_079_000M1_scaffold_1195_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20993..21481
DNA (489bp) protein (163aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system n=2 Tax=Lachnospiraceae RepID=E5VJ71_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system {ECO:0000313|EMBL:CDA33134.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
L3_079_000M1_scaffold_1195_23
unknown

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21530..21808
DNA (279bp) protein (93aa)
Phosphotransferase system, galactitol-specific IIB component (EC:2.7.1.69)
Phosphotransferase system, galactitol-specific IIB component {ECO:0000313|EMBL:CBL39060.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL39060.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphotransferase system, galactitol-specific IIB component n=3 Tax=Clostridiales RepID=D4MUJ4_9FIRM
L3_079_000M1_scaffold_1195_24
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21859..23235
DNA (1377bp) protein (459aa)
PTS system Galactitol-specific IIC component n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ69_9FIRM
PTS system Galactitol-specific IIC component {ECO:0000313|EMBL:EFV17070.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Phosphotransferase system, galactitol-specific IIC component
L3_079_000M1_scaffold_1195_25
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23293..24291
DNA (999bp) protein (333aa)
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.121 2.7.1.-)
Dak1 domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ68_9FIRM
Dak1 domain-containing protein {ECO:0000313|EMBL:EFV17069.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_079_000M1_scaffold_1195_26
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24331..26403
DNA (2073bp) protein (691aa)
PRD domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ66_9FIRM
PRD domain-containing protein {ECO:0000313|EMBL:EFV17141.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Transcriptional antiterminator
L3_079_000M1_scaffold_1195_27
unknown

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26406..27074
DNA (669bp) protein (223aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:5.1.3.4)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:CBL39064.1}; EC=5.1.3.4 {ECO:0000313|EMBL:CBL39064.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=2 Tax=Clostridiales RepID=D4MUJ8_9FIRM
L3_079_000M1_scaffold_1195_28
unknown

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27104..28114
DNA (1011bp) protein (337aa)
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.121 2.7.1.-)
Dihydroxyacetone kinase DhaK subunit {ECO:0000313|EMBL:CBL39065.1}; EC=2.7.1.- {ECO:0000313|EMBL:CBL39065.1};; EC=2.7.1.121 {ECO:0000313|EMBL:CBL39065.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Dihydroxyacetone kinase DhaK subunit n=2 Tax=Clostridiales RepID=D4MUJ9_9FIRM
L3_079_000M1_scaffold_1195_29
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28128..28748
DNA (621bp) protein (207aa)
Dihydroxyacetone kinase (EC:2.7.1.-)
Dihydroxyacetone kinase n=2 Tax=Clostridiales RepID=D4MUK0_9FIRM
DAK2 domain-containing protein {ECO:0000313|EMBL:EFV17138.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_079_000M1_scaffold_1195_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28822..30054
DNA (1233bp) protein (411aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ62_9FIRM
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EFV17137.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Displaying items 1-30 of 33 in total

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