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L3_079_000M1_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_49_1
unknown

Not on your lists

comp(76..165)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_079_000M1_scaffold_49_2
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(185..895)
DNA (711bp) protein (237aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
PHP domain-containing protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C482_9FIRM
PHP domain-containing protein {ECO:0000313|EMBL:CDD72959.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_49_3
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(1030..2661)
DNA (1632bp) protein (544aa)
Peptide chain release factor 3 n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C6L8_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
bacterial peptide chain release factor 3 (bRF-3)
L3_079_000M1_scaffold_49_4
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

2820..3701
DNA (882bp) protein (294aa)
Aldose 1-epimerase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4D1_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CDD72956.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Galactose mutarotase and related enzymes
L3_079_000M1_scaffold_49_5
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(3764..4333)
DNA (570bp) protein (190aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases (EC:4.1.1.-)
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4R4_9FIRM
L3_079_000M1_scaffold_49_6
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(4358..5818)
DNA (1461bp) protein (487aa)
3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C477_9FIRM
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:CDD72954.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_49_7
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(6030..6785)
DNA (756bp) protein (252aa)
UPF0271 protein BN579_00808 n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C6L2_9FIRM
UPF0271 protein BN579_00808 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Uncharacterized proteins, homologs of lactam utilization protein B
L3_079_000M1_scaffold_49_8
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(6838..8184)
DNA (1347bp) protein (449aa)
biotin carboxylase/acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C5A0_9FIRM
Acetyl-CoA carboxylase {ECO:0000313|EMBL:CDD72952.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_49_9
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(8197..8631)
DNA (435bp) protein (145aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4C6_9FIRM
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:CDD72951.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
L3_079_000M1_scaffold_49_10
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(8648..9652)
DNA (1005bp) protein (335aa)
Allophanate hydrolase subunit 2 n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4R0_9FIRM
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:CDD72950.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
biotin-dependent carboxylase uncharacterized domain
L3_079_000M1_scaffold_49_11
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9656..10384)
DNA (729bp) protein (243aa)
TIGR00370 family protein n=3 Tax=Clostridiales RepID=B0NZ10_9CLOT
conserved hypothetical protein TIGR00370
Uncharacterized protein {ECO:0000313|EMBL:CDA31683.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_079_000M1_scaffold_49_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10421..11644)
DNA (1224bp) protein (408aa)
Mn2+ and Fe2+ transporters of the NRAMP family n=4 Tax=Clostridiales RepID=D4MW90_9FIRM
Mn2+ and Fe2+ transporters of the NRAMP family
Signal peptide protein, YSIRK family {ECO:0000313|EMBL:EKY20211.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_079_000M1_scaffold_49_13
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(12561..13490)
DNA (930bp) protein (310aa)
Alpha/beta hydrolase fold protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4C1_9FIRM
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CDD72946.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Lysophospholipase
L3_079_000M1_scaffold_49_14
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

13586..14371
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C469_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD72944.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_49_15
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

14669..15586
DNA (918bp) protein (306aa)
TIGR01212 family radical SAM protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C589_9FIRM
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:CDD72942.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
radical SAM protein, TIGR01212 family
L3_079_000M1_scaffold_49_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15720..16529)
DNA (810bp) protein (270aa)
Transcriptional regulator, DeoR family n=1 Tax=Clostridium sp. SS2/1 RepID=B0P097_9CLOT
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EDS22045.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Transcriptional regulators of sugar metabolism
L3_079_000M1_scaffold_49_17
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16593..17366)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P099_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS22047.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L3_079_000M1_scaffold_49_18
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17374..18087)
DNA (714bp) protein (238aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium sp. SS2/1 RepID=B0P0A0_9CLOT
L3_079_000M1_scaffold_49_19
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18387..19220
DNA (834bp) protein (278aa)
HAD hydrolase, family IIB n=1 Tax=Clostridium sp. SS2/1 RepID=B0P0A1_9CLOT
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDS22049.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
HAD family hydrolase
L3_079_000M1_scaffold_49_20
unknown

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comp(19238..19366)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_079_000M1_scaffold_49_21
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19527..20918)
DNA (1392bp) protein (464aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.21)
Glycosyl hydrolase, family 1 n=1 Tax=Clostridium sp. SS2/1 RepID=B0P044_9CLOT
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS22052.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_079_000M1_scaffold_49_22
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21046..21885)
DNA (840bp) protein (280aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Clostridium sp. SS2/1 RepID=B0P045_9CLOT
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EDS22053.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
PTS system IID component, Man family (TC 4.A.6)
L3_079_000M1_scaffold_49_23
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21887..22723)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P046_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS22054.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
PTS sorbose-specific transporter subunit IIC
L3_079_000M1_scaffold_49_24
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22753..23244)
DNA (492bp) protein (164aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=1 Tax=Clostridium sp. SS2/1 RepID=B0P047_9CLOT
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EDS22055.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_079_000M1_scaffold_49_25
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23271..23690)
DNA (420bp) protein (140aa)
PTS system fructose IIA component n=1 Tax=Clostridium sp. SS2/1 RepID=B0P048_9CLOT
PTS system fructose IIA component {ECO:0000313|EMBL:EDS22056.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
PTS system fructose(mannose)-specific transporter subunit IIA
L3_079_000M1_scaffold_49_26
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23926..24741)
DNA (816bp) protein (272aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P049_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EDS22057.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Transcriptional regulators
L3_079_000M1_scaffold_49_27
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24948..25226
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P050_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS22058.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_079_000M1_scaffold_49_28
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25251..27677
DNA (2427bp) protein (809aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDS22059.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDS22059.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
pyruvate formate-lyase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Clostridium sp. SS2/1 RepID=B0P051_9CLOT
L3_079_000M1_scaffold_49_29
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27683..28594
DNA (912bp) protein (304aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Radical SAM domain protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P052_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EDS22060.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L3_079_000M1_scaffold_49_30
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28684..32508)
DNA (3825bp) protein (1275aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.80)
Repeat protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P053_9CLOT
Repeat protein {ECO:0000313|EMBL:EDS22061.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Displaying items 1-30 of 124 in total

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