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L3_079_000M1_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_475_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..312)
DNA (312bp) protein (104aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=3 Tax=Lachnospiraceae RepID=E5VHB8_9FIRM
L3_079_000M1_scaffold_475_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(333..1700)
DNA (1368bp) protein (456aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EDS21136.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EDS21136.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Acetyl-CoA carboxylase, biotin carboxylase n=2 Tax=Clostridiales RepID=D4MYF6_9FIRM
L3_079_000M1_scaffold_475_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1715..2140)
DNA (426bp) protein (142aa)
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=5 Tax=Clostridiales RepID=D4MYF5_9FIRM
L3_079_000M1_scaffold_475_4
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2160..2603)
DNA (444bp) protein (148aa)
Acetyl-CoA carboxylase n=2 Tax=Lachnospiraceae RepID=E5VHC1_9FIRM
Acetyl-CoA carboxylase {ECO:0000313|EMBL:EFV17691.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
biotin carboxyl carrier protein
L3_079_000M1_scaffold_475_5
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2621..3865)
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Lachnospiraceae RepID=E5VHC2_9FIRM
L3_079_000M1_scaffold_475_6
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3878..4618)
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Lachnospiraceae RepID=E5VHC3_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EFV17693.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_079_000M1_scaffold_475_7
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4621..5541)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Lachnospiraceae RepID=E5VHC4_9FIRM
L3_079_000M1_scaffold_475_8
unknown

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comp(5655..5888)
DNA (234bp) protein (78aa)
Acyl carrier protein n=5 Tax=Clostridiales RepID=D4MYF0_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_079_000M1_scaffold_475_9
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6196..7134
DNA (939bp) protein (313aa)
ABC transporter n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZSZ8_9FIRM
ABC transporter {ECO:0000313|EMBL:CDA32167.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
ABC-type multidrug transport system, ATPase component
L3_079_000M1_scaffold_475_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7134..8000
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VHC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17697.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
ABC-2 type transporter.
L3_079_000M1_scaffold_475_11
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

8013..9431
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD70536.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
AraC family transcriptional regulator
L3_079_000M1_scaffold_475_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9440..10321
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q3Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY22616.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L3_079_000M1_scaffold_475_13
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(10591..11958)
DNA (1368bp) protein (456aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BZP2_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_475_14
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

12282..13865
DNA (1584bp) protein (528aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXC8_9FIRM
L3_079_000M1_scaffold_475_15
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(14382..14645)
DNA (264bp) protein (88aa)
Phosphotransferase System HPr (HPr) Family n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXN5_9FIRM
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CDD70540.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Phosphotransferase System HPr (HPr) Family
L3_079_000M1_scaffold_475_16
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(14642..15568)
DNA (927bp) protein (309aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXH4_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_475_17
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(15572..16426)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein BN579_01266 n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYG6_9FIRM
Nucleotide-binding protein BN579_01266 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Predicted P-loop-containing kinase
L3_079_000M1_scaffold_475_18
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(16457..17365)
DNA (909bp) protein (303aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BZP7_9FIRM
L3_079_000M1_scaffold_475_19
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(17388..18323)
DNA (936bp) protein (312aa)
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXD2_9FIRM
Glucokinase {ECO:0000313|EMBL:CDD70544.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_475_20
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(18328..19263)
DNA (936bp) protein (312aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXN9_9FIRM
L3_079_000M1_scaffold_475_21
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(19328..21193)
DNA (1866bp) protein (622aa)
UvrABC system protein C n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXI1_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
excinuclease ABC, C subunit
L3_079_000M1_scaffold_475_22
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(21357..22097)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BZQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD70548.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_475_23
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(22140..22481)
DNA (342bp) protein (114aa)
Predicted sugar phosphatases of the HAD superfamily (EC:3.1.3.41)
Predicted sugar phosphatases of the HAD superfamily n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXP4_9FIRM
Predicted sugar phosphatases of the HAD superfamily {ECO:0000313|EMBL:CDD70550.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_475_24
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(22696..23577)
DNA (882bp) protein (294aa)
Galactose mutarotase and related enzymes n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYH7_9FIRM
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CDD70552.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Galactose mutarotase and related enzymes
L3_079_000M1_scaffold_475_25
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(23615..24463)
DNA (849bp) protein (283aa)
ketose-bisphosphate aldolases (EC:4.1.2.13 4.1.2.40)
Fructose-bisphosphate aldolase class-II protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXE1_9FIRM
Fructose-bisphosphate aldolase class-II protein {ECO:0000313|EMBL:CDD70554.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_079_000M1_scaffold_475_26
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(24477..25412)
DNA (936bp) protein (312aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
1-phosphofructokinase (EC:2.7.1.144)
Tagatose-6-phosphate kinase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYI2_9FIRM
L3_079_000M1_scaffold_475_27
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(25435..26334)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BZR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD70558.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
sugar phosphate isomerase/epimerase
L3_079_000M1_scaffold_475_28
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(26382..26921)
DNA (540bp) protein (180aa)
6-phospho 3-hexuloisomerase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXQ4_9FIRM
6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:CDD70560.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
6-phospho-3-hexuloisomerase
L3_079_000M1_scaffold_475_29
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(26935..27984)
DNA (1050bp) protein (350aa)
Putative chlorophyll synthesis pathway protein BchC n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYI9_9FIRM
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:CDD70562.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_079_000M1_scaffold_475_30
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(27997..28647)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BXF0_9FIRM
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:CDD70564.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Displaying items 1-30 of 122 in total

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