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L3_079_000M1_scaffold_1153

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1153_1
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(108..1286)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H5G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29154.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
cation diffusion facilitator family transporter
L3_079_000M1_scaffold_1153_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1426..1740
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R6E4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24196.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_079_000M1_scaffold_1153_3
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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2003..3724
DNA (1722bp) protein (574aa)
ABC transporter transmembrane region n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EPJ0_9FIRM
ABC transporter transmembrane region {ECO:0000313|EMBL:CCX93314.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
multidrug ABC transporter ATPase/permease
L3_079_000M1_scaffold_1153_4
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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3721..5481
DNA (1761bp) protein (587aa)
ABC transporter related protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXK9_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CCX93312.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
ABC-type transporter, ATPase subunit
L3_079_000M1_scaffold_1153_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(6206..6715)
DNA (510bp) protein (170aa)
Isopentenyldiphosphate isomerase id=3038776 bin=GWF2_Clostridiales_38_85 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
isopentenyldiphosphate isomerase
Tax=GWF2_Clostridiales_38_85_curated
L3_079_000M1_scaffold_1153_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(6726..7289)
DNA (564bp) protein (188aa)
Putative manganese efflux pump MntP n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XW98_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Predicted membrane protein
L3_079_000M1_scaffold_1153_7
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7349..7933)
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CP81_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48465.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
NUDIX hydrolase
L3_079_000M1_scaffold_1153_8
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8240..9631)
DNA (1392bp) protein (464aa)
Uracil-xanthine permease n=1 Tax=Clostridium sp. CAG:510 RepID=R6BY17_9CLOT
Uracil-xanthine permease {ECO:0000313|EMBL:CDA69023.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
putative xanthine/uracil permease
L3_079_000M1_scaffold_1153_9
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9682..10218)
DNA (537bp) protein (179aa)
Bifunctional protein PyrR n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U7H6_OCEP5
uracil phosphoribosyltransferase
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L3_079_000M1_scaffold_1153_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(10485..11396)
DNA (912bp) protein (304aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IND9_9FIRM
L3_079_000M1_scaffold_1153_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(11412..12701)
DNA (1290bp) protein (430aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EBW3_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CCX89918.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
O-acetylhomoserine/O-acetylserine sulfhydrylase
L3_079_000M1_scaffold_1153_12
unknown

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12938..13231
DNA (294bp) protein (98aa)

This feature has no annotations

L3_079_000M1_scaffold_1153_13
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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13218..13634
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30371.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_079_000M1_scaffold_1153_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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13631..14398
DNA (768bp) protein (256aa)
atpB; F0 sector of membrane-bound ATP synthase, subunit a (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MR75_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_079_000M1_scaffold_1153_15
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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14457..14696
DNA (240bp) protein (80aa)
ATP synthase F0 C subunit n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GY42_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
F0F1 ATP synthase subunit C
L3_079_000M1_scaffold_1153_16
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

14743..15261
DNA (519bp) protein (173aa)
atpF; F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H8Y7_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_079_000M1_scaffold_1153_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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15254..15787
DNA (534bp) protein (178aa)
ATP synthase F1 subcomplex delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVP3_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_079_000M1_scaffold_1153_18
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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15823..17331
DNA (1509bp) protein (503aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H9X7_9FIRM
L3_079_000M1_scaffold_1153_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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17344..18180
DNA (837bp) protein (279aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVP1_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_079_000M1_scaffold_1153_20
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18199..19602
DNA (1404bp) protein (468aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L5Z8_9FIRM
L3_079_000M1_scaffold_1153_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19599..19997
DNA (399bp) protein (133aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVN9_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_079_000M1_scaffold_1153_22
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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20157..20552
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003734D3D
Uncharacterized protein {ECO:0000313|EMBL:CEN42275.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynodegmi.;"
L3_079_000M1_scaffold_1153_23
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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20577..21158
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1QPW8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ERH29565.1}; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
hypothetical protein
L3_079_000M1_scaffold_1153_24
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21233..21907
DNA (675bp) protein (225aa)
tRNA (Guanine-N(1)-)-methyltransferase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNI8_9FIRM
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:CDB25970.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Acetyltransferases
L3_079_000M1_scaffold_1153_25

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comp(22020..22511)
DNA (492bp) protein (164aa)
A/G-specific adenine glycosylase n=1 Tax=Blautia sp. CAG:37 RepID=R7JUG8_9FIRM
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:AHF25526.1}; TaxID=1393678 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_8.;"
G:T/U mismatch-specific DNA glycosylase
L3_079_000M1_scaffold_1153_26
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(22561..24114)
DNA (1554bp) protein (518aa)
Putative stage V sporulation protein B n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LNH3_9FIRM
Putative stage V sporulation protein B {ECO:0000313|EMBL:CDB87430.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
polysaccharide biosynthesis protein
L3_079_000M1_scaffold_1153_27
unknown

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24159..24713
DNA (555bp) protein (185aa)

This feature has no annotations

L3_079_000M1_scaffold_1153_28
unknown

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comp(24762..25313)
DNA (552bp) protein (184aa)

This feature has no annotations

L3_079_000M1_scaffold_1153_29
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(25334..26065)
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H2M2_9FIRM
hypothetical protein
L3_079_000M1_scaffold_1153_30
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

26420..28600
DNA (2181bp) protein (727aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ATP-dependent DNA helicase UvrD/REP family protein (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDM3_9FIRM
Displaying items 1-30 of 33 in total

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