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L3_079_000M1_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_187_1
unknown

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_079_000M1_scaffold_187_2
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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812..1762
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HYM5_9FIRM
L3_079_000M1_scaffold_187_3
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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2028..2930
DNA (903bp) protein (301aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJH8_9FIRM
L3_079_000M1_scaffold_187_4

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2938..3318
DNA (381bp) protein (127aa)
Putative P-loop-containing kinase n=1 Tax=uncultured bacterium A1Q1_fos_160 RepID=L7W0R3_9BACT
Putative P-loop-containing kinase {ECO:0000313|EMBL:AGC72105.1}; TaxID=1256550 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_160.;"
hypothetical protein
L3_079_000M1_scaffold_187_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3315..4244
DNA (930bp) protein (310aa)
Hypothetical Cytosolic Protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H836_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000M1_scaffold_187_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

4279..7761
DNA (3483bp) protein (1161aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HV25_9FIRM
L3_079_000M1_scaffold_187_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

7872..9206
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87608.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_079_000M1_scaffold_187_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

9262..9948
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H053_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB31103.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
OmpR family two-component response regulator
L3_079_000M1_scaffold_187_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

9966..11396
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative two-component histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LP32_9FIRM
L3_079_000M1_scaffold_187_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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11408..12415
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41494.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_079_000M1_scaffold_187_11
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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12409..13278
DNA (870bp) protein (290aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ERM8_9FIRM
L3_079_000M1_scaffold_187_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists


13281..14381
DNA (1101bp) protein (367aa)
Protein RecA n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H049_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
recA; RecA protein
L3_079_000M1_scaffold_187_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

14381..15001
DNA (621bp) protein (207aa)
Regulatory protein RecX n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHE9_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
recX; regulatory protein RecX
L3_079_000M1_scaffold_187_14
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

15021..16355
DNA (1335bp) protein (445aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HC29_9FIRM
hypothetical protein
L3_079_000M1_scaffold_187_15
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

16355..16900
DNA (546bp) protein (182aa)
pgsA; phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ET95_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CCX91261.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_079_000M1_scaffold_187_16
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17242..17991)
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AFT4_9CLOT
L3_079_000M1_scaffold_187_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18025..18858)
DNA (834bp) protein (278aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSF9_9FIRM
L3_079_000M1_scaffold_187_18
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18884..19648)
DNA (765bp) protein (255aa)
Deoxyribose-phosphate aldolase n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XPX5_9BACL
deoxyribose-phosphate aldolase
Tax=BJP_IG2157_Clostridiales_52_13
L3_079_000M1_scaffold_187_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19690..19977)
DNA (288bp) protein (96aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8I8_9FIRM
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:EDS12234.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
L3_079_000M1_scaffold_187_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19974..20249)
DNA (276bp) protein (92aa)
BMC domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8I9_9FIRM
BMC domain protein {ECO:0000313|EMBL:EDS12235.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_079_000M1_scaffold_187_21
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20266..20538)
DNA (273bp) protein (91aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J0_9FIRM
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:EDS12236.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_079_000M1_scaffold_187_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20542..20817)
DNA (276bp) protein (92aa)
BMC domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8I9_9FIRM
BMC domain protein {ECO:0000313|EMBL:EDS12235.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_079_000M1_scaffold_187_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20852..21127)
DNA (276bp) protein (92aa)
BMC domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8I9_9FIRM
BMC domain protein {ECO:0000313|EMBL:EDS12235.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_079_000M1_scaffold_187_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21173..21718)
DNA (546bp) protein (182aa)
BMC domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J2_9FIRM
BMC domain protein {ECO:0000313|EMBL:EDS12238.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
carbon dioxide concentrating mechanism/carboxysome shell protein
L3_079_000M1_scaffold_187_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21715..23028)
DNA (1314bp) protein (438aa)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J3_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS12239.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
L3_079_000M1_scaffold_187_26
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23039..24439)
DNA (1401bp) protein (467aa)
Aldehyde Dehydrogenase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1Q6_THEOJ
Aldehyde Dehydrogenase
Tax=BJP_IG2157_Clostridiales_52_13
L3_079_000M1_scaffold_187_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24491..24793)
DNA (303bp) protein (101aa)
Carbon dioxide concentrating mechanism protein CcmL n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J4_9FIRM
Carbon dioxide concentrating mechanism protein CcmL {ECO:0000313|EMBL:EDS12240.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
L3_079_000M1_scaffold_187_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24780..25484)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12241.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_079_000M1_scaffold_187_29
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25508..26146)
DNA (639bp) protein (213aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Phosphate propanoyltransferase n=2 Tax=Clostridium sordellii RepID=T0E0W7_CLOSO
propanediol utilization protein
L3_079_000M1_scaffold_187_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26158..27348)
DNA (1191bp) protein (397aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EDS12243.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDS12243.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8J6_9FIRM
iron-containing alcohol dehydrogenase
Displaying items 1-30 of 98 in total

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