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L3_079_000M1_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_415_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..724)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61122.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
DNA methylase
L3_079_000M1_scaffold_415_2
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(739..1677)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY75464.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_079_000M1_scaffold_415_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1677..2261)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5B6D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49774.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_079_000M1_scaffold_415_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2236..2490)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2G8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49775.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_079_000M1_scaffold_415_5
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2504..3418)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=2 Tax=Firmicutes RepID=D5AGK0_STRGZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE30965.1}; TaxID=423211 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis (strain GZ1).;"
L3_079_000M1_scaffold_415_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3429..3716)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B884_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50469.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_079_000M1_scaffold_415_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3781..3873)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50470.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_079_000M1_scaffold_415_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(3873..8150)
DNA (4278bp) protein (1426aa)
Cna protein B-type domain n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6M0_9FIRM
Cna protein B-type domain {ECO:0000313|EMBL:CCX74464.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Cna protein B-type domain.
L3_079_000M1_scaffold_415_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(8219..8926)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74465.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_079_000M1_scaffold_415_10
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(9175..10125)
DNA (951bp) protein (317aa)
ParB-like partition proteins n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DEZ9_9FIRM
ParB-like partition proteins {ECO:0000313|EMBL:CCX74466.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ParB-like partition proteins
L3_079_000M1_scaffold_415_11
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10079..10903)
DNA (825bp) protein (275aa)
ATPases involved in chromosome partitioning n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ERZ0_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDE05400.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ATPases involved in chromosome partitioning
L3_079_000M1_scaffold_415_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11626..13563)
DNA (1938bp) protein (646aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
lysyl-tRNA synthetase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B33B09
L3_079_000M1_scaffold_415_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(13579..14058)
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQL6_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
transcription elongation factor GreA
L3_079_000M1_scaffold_415_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(14130..15380)
DNA (1251bp) protein (417aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase S41 family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LKZ6_9FIRM
Peptidase S41 family {ECO:0000313|EMBL:CDB88118.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_079_000M1_scaffold_415_15
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(15525..16820)
DNA (1296bp) protein (432aa)
Peptidase M23 family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HZE4_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CDB31192.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
putative metalloendopeptidase
L3_079_000M1_scaffold_415_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(16845..17729)
DNA (885bp) protein (295aa)
Cell division protein FtsX n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQM1_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ftsX; cell division protein FtsX
L3_079_000M1_scaffold_415_17
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(17716..18405)
DNA (690bp) protein (230aa)
Cell division ATP-binding protein FtsE n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LL02_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDB88123.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ftsE; cell division protein FtsE
L3_079_000M1_scaffold_415_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(18494..19588)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39732.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_079_000M1_scaffold_415_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(19755..20504)
DNA (750bp) protein (250aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rsuA; pseudouridine synthase RsuA (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICC7_9FIRM
L3_079_000M1_scaffold_415_20
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

20590..21159
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EMQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX93970.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L3_079_000M1_scaffold_415_21
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21409..22065
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TB69_9CLOT
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
L3_079_000M1_scaffold_415_22
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(22069..22683)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H282_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30900.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
HAD-superfamily hydrolase
L3_079_000M1_scaffold_415_23
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22799..24901)
DNA (2103bp) protein (701aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EUN9_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDE05983.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L3_079_000M1_scaffold_415_24
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24955..25239)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WJA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD04211.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L3_079_000M1_scaffold_415_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25443..26153
DNA (711bp) protein (237aa)
Conserved domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYD7_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EFR33136.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Hypothetical protein
L3_079_000M1_scaffold_415_26
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26208..28220)
DNA (2013bp) protein (671aa)
Arylsulfatase {ECO:0000313|EMBL:EFF64888.1}; EC=3.1.6.- {ECO:0000313|EMBL:EFF64888.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
Arylsulfatase n=2 Tax=Turicibacter RepID=D4W2K3_9FIRM
hypothetical protein
L3_079_000M1_scaffold_415_27
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

28480..29664
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87917.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_079_000M1_scaffold_415_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

29675..30610
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39865.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_079_000M1_scaffold_415_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30672..31382)
DNA (711bp) protein (237aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVT9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY33928.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulator
L3_079_000M1_scaffold_415_30
unknown

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comp(31568..32419)
DNA (852bp) protein (284aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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