ggKbase home page

L3_079_000M1_scaffold_781_13

Organism: dasL3_079_000M1_metabat_metabat_14_fa_fa

near complete RP 38 / 55 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 13508..14800

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 451.0
  • Bit_score: 274
  • Evalue 1.10e-70
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGJ46440.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.7
  • Coverage: 451.0
  • Bit_score: 274
  • Evalue 1.60e-70
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 455.0
  • Bit_score: 262
  • Evalue 1.70e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcaceae bacterium D16 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1293
ATGCAGATCTTTCAGGAACAGAAGCCCGTTCAGCAGCAGCGTCCGCAGATGTACGCCGCTGTTGAAATTTTACAGCTGGACGTATGCCAGCTGCAATCCTATATCAATACCGCTCTGCTGGAAAATCCCACGCTGGAATGCGGAGCCGCGCCGGGCGTGAGTCTGCTTGACGATCTCTCCGCCGGCGGGCATGCCGCCGCGGGCGAGGATGCGGAGCACATGCAGCCGGATTTTGCCGACCGGGACGCCGTCGCCTACGGCGAGGACCTGACGACCCATCTGCAGTTTCAGGCGGAGCGCCTGTCGCTGGAGCCGGAGCTGCAGCGCGCCGTGCTCGCCGTCATCCATGCGCTCGATGCCGACGGCTATCTGCGCACCGATGTCTCCGCGCTCGGCCCGGCCGCGCTTGTCGATGCCGCCGTCCAGATCGTTCAGCGCCTCGACCCGCCCGGCGTCGGCGCAAGGACGCTTTCGGAATGCCTCTGCCTGCAGCTGCAAGCGCTCGGCGAGTCCGGGCTGGCCTGCACGATCGCGGAGCACTATCTCGAGCAGGCTGGGCATCACGCTTTTGCGGCCATCGCCGCAAGCGAGCATGTTCCCCTTGCCGCCGTGCAGGAGGCCTACCGGCAGATCCAGAGCCTTTCGCCCTACCCGTGCGCGGAATTCAGCCGCGCGCAGGACGACGGCTATGTCGTCCCCGACGTGCTCCTGCAGGAAAAAGACGGCGTGCTCAGCGTCGCCGTCAACAGGGCCTACACGCCGGAGCTGTCCGTCAGCAGTTTCTACCGCTCCCTCGTCCGCGAGACGGACGATCCGGAGGCGCGGCAGTATATCGTCAAAAAAGTCTCGCAGGCGGAATGGCTCATCAGCTGCATCCGGCAGCGGGAGGAGACGCTCCTGCGCTGCTGTCAGGAAATTCTGAAGCGGCAGCTGCCGTATTTCCGTTCCGGGCAGGCGCTCGCTCCGATGACGATGCAGGACATCGCGCAGGCCGTCGGCCTGCACACCTCCACCGTCAGCCGCGCGCTCAGCGGGAAGTATATCCAGACGCCGCAGGGCGTCCGCCTGCTGCGCAGCCTGTTTTCCGCAAAGCTGGCAGGCGGTGAGGTCTCCGGCGTCATGGCACAGCAGGCCATCGCCGTGCTTGTGCAGCAGGAGGATAAGCACGCTCCCCTGTCCGATCAGGTGCTTGCCGAGCGGCTGCAAGCGCAGGGCATCGACATCTCGCGCCGCACCGTGGCAAAATACCGTCAGCTGCTGCAGATTCCGTCCGCCGCAACCCGCAGAGCTTAA
PROTEIN sequence
Length: 431
MQIFQEQKPVQQQRPQMYAAVEILQLDVCQLQSYINTALLENPTLECGAAPGVSLLDDLSAGGHAAAGEDAEHMQPDFADRDAVAYGEDLTTHLQFQAERLSLEPELQRAVLAVIHALDADGYLRTDVSALGPAALVDAAVQIVQRLDPPGVGARTLSECLCLQLQALGESGLACTIAEHYLEQAGHHAFAAIAASEHVPLAAVQEAYRQIQSLSPYPCAEFSRAQDDGYVVPDVLLQEKDGVLSVAVNRAYTPELSVSSFYRSLVRETDDPEARQYIVKKVSQAEWLISCIRQREETLLRCCQEILKRQLPYFRSGQALAPMTMQDIAQAVGLHTSTVSRALSGKYIQTPQGVRLLRSLFSAKLAGGEVSGVMAQQAIAVLVQQEDKHAPLSDQVLAERLQAQGIDISRRTVAKYRQLLQIPSAATRRA*