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L3_079_000M1_scaffold_781

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_781_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(305..1099)
DNA (795bp) protein (265aa)
UPI0002E8B41E related cluster n=1 Tax=unknown RepID=UPI0002E8B41E
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:EDM98768.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_079_000M1_scaffold_781_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1288..1662)
DNA (375bp) protein (125aa)
UPI00030111CB related cluster n=1 Tax=unknown RepID=UPI00030111CB
Uncharacterized protein {ECO:0000313|EMBL:EOS64347.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
glyoxalase family protein
L3_079_000M1_scaffold_781_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1786..3390)
DNA (1605bp) protein (535aa)
UPI0002E83E58 related cluster n=1 Tax=unknown RepID=UPI0002E83E58
Uncharacterized protein {ECO:0000313|EMBL:EDP13326.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_079_000M1_scaffold_781_4
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3492..3971)
DNA (480bp) protein (160aa)
UPI000311BCDC related cluster n=1 Tax=unknown RepID=UPI000311BCDC
PTS system sorbose subfamily transporter subunit IIB
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:CCP24979.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_079_000M1_scaffold_781_5
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4052..4846)
DNA (795bp) protein (265aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=Clostridium sp. BNL1100 RepID=H2JBL5_9CLOT
membrane complex biogenesis protein, BtpA family
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:AEY67161.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
L3_079_000M1_scaffold_781_6
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4871..5320)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V8I8_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK46448.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L3_079_000M1_scaffold_781_7
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(5333..7054)
DNA (1722bp) protein (574aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E2I4_9FIRM
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDA91454.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_079_000M1_scaffold_781_8
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7070..7837)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64186.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
short-chain dehydrogenase/reductase SDR
L3_079_000M1_scaffold_781_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8061..9725)
DNA (1665bp) protein (555aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AR67_9CLOT
phosphotransferase system enzyme I
L3_079_000M1_scaffold_781_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9769..10035)
DNA (267bp) protein (89aa)
Phosphocarrier, HPr family n=2 Tax=Clostridiales RepID=A5ZX47_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EDM85805.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
PTS system HPr phosphocarrier
L3_079_000M1_scaffold_781_11
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10082..12880)
DNA (2799bp) protein (933aa)
PTS system transcriptional activator n=1 Tax=Acetonema longum DSM 6540 RepID=F7NLJ2_9FIRM
PTS system transcriptional activator {ECO:0000313|EMBL:EGO63087.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
PTS system transcriptional activator
L3_079_000M1_scaffold_781_12
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12918..13337)
DNA (420bp) protein (140aa)
PTS system fructose IIA protein n=1 Tax=Anaerostipes sp. 3_2_56FAA RepID=E5VRL0_9FIRM
PTS system fructose IIA protein {ECO:0000313|EMBL:EFV23492.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
putative PTS system, galactosamine-specific IIA component
L3_079_000M1_scaffold_781_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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13508..14800
DNA (1293bp) protein (431aa)
RNA polymerase sigma-54 factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE0_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGJ46440.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
RNA polymerase sigma-54 factor
L3_079_000M1_scaffold_781_14
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14797..15441)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QRP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC35699.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_079_000M1_scaffold_781_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15602..16717)
DNA (1116bp) protein (372aa)
4Fe-4S binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5E5_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEU96833.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
aldo/keto reductase
L3_079_000M1_scaffold_781_16
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16953..17555
DNA (603bp) protein (201aa)
Aqualysin 1 n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FFU9_9BACT
Aqualysin 1 {ECO:0000313|EMBL:EJF09134.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
aqualysin 1
L3_079_000M1_scaffold_781_17
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

17668..19260
DNA (1593bp) protein (531aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EZ84_9FIRM
L3_079_000M1_scaffold_781_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19317..20057)
DNA (741bp) protein (247aa)
Sel1 repeat protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW29_9FIRM
Sel1 repeat protein {ECO:0000313|EMBL:CDB25481.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_079_000M1_scaffold_781_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20047..20478)
DNA (432bp) protein (144aa)
Oxidoreductase n=1 Tax=Clostridium sp. CAG:58 RepID=R6R8H9_9CLOT
Oxidoreductase {ECO:0000313|EMBL:CDC45223.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_079_000M1_scaffold_781_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20537..23479)
DNA (2943bp) protein (981aa)
Putative oxidoreductase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPN7_9FIRM
Putative oxidoreductase {ECO:0000313|EMBL:CDB27398.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative oxidoreductase
L3_079_000M1_scaffold_781_21
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(23576..24916)
DNA (1341bp) protein (447aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY42_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDB87031.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative hydrolase
L3_079_000M1_scaffold_781_22
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25627..28722
DNA (3096bp) protein (1032aa)
Surface protein C n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EM89_9FIRM
Surface protein C {ECO:0000313|EMBL:CDE03571.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_079_000M1_scaffold_781_23
unknown

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28740..28916
DNA (177bp) protein (59aa)

This feature has no annotations

L3_079_000M1_scaffold_781_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28982..29695
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50762.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_079_000M1_scaffold_781_25
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

29692..29970
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87961.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L3_079_000M1_scaffold_781_26
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

30119..31510
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAJ7_9FIRM
L3_079_000M1_scaffold_781_27
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(31610..32755)
DNA (1146bp) protein (382aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH65_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
RpoD4; RNA polymerase sigma factor RpoD
L3_079_000M1_scaffold_781_28
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(32949..33638)
DNA (690bp) protein (230aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMR6_9FIRM
L3_079_000M1_scaffold_781_29
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34131..34877
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A8N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54675.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Acetyltransferase (GNAT) family.
L3_079_000M1_scaffold_781_30
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(34926..35384)
DNA (459bp) protein (153aa)
von Willebrand factor type A domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I328_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDB44528.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
von Willebrand factor type A
Displaying 30 items

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