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L3_079_000M1_scaffold_1369

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1369_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(254..976)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZH87_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74899.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1046..1765
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZH86_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74898.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1812..3506)
DNA (1695bp) protein (565aa)
CoA-substrate-specific enzyme activase, putative n=2 Tax=Eubacterium rectale RepID=D4JJW5_9FIRM
CoA-substrate-specific enzyme activase, putative {ECO:0000313|EMBL:CBK93912.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
CoA-substrate-specific enzyme activase, putative
L3_079_000M1_scaffold_1369_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3579..4850)
DNA (1272bp) protein (424aa)
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UN54_9FIRM
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit {ECO:0000313|EMBL:CDC72227.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
L3_079_000M1_scaffold_1369_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4945..5718)
DNA (774bp) protein (258aa)
precorrin-2 C20-methyltransferase (EC:2.1.1.130)
Precorrin-2 C20-methyltransferase {ECO:0000313|EMBL:CBK91156.1}; EC=2.1.1.130 {ECO:0000313|EMBL:CBK91156.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Precorrin-2 methyltransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZH83_EUBR3
L3_079_000M1_scaffold_1369_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5748..6212)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D4JJW8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74894.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6291..8081)
DNA (1791bp) protein (597aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UN63_9FIRM
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:CDC72237.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_079_000M1_scaffold_1369_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8270..9775)
DNA (1506bp) protein (502aa)
Putative xanthine/uracil permease family protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZH80_EUBR3
putative xanthine/uracil permease family protein
Putative xanthine/uracil permease family protein {ECO:0000313|EMBL:ACR74892.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9872..10519)
DNA (648bp) protein (216aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ACR74890.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10509..11783)
DNA (1275bp) protein (425aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TFM6_9FIRM
phosphoribosylamine--glycine ligase
L3_079_000M1_scaffold_1369_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11880..12506)
DNA (627bp) protein (209aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBK91149.1};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYL1_9FIRM
L3_079_000M1_scaffold_1369_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12558..13583)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=4 Tax=Eubacterium RepID=PUR5_EUBR3
phosphoribosylformylglycinamidine cyclo-ligase
L3_079_000M1_scaffold_1369_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13837..14682
DNA (846bp) protein (282aa)
Uncharacterized conserved protein n=3 Tax=Eubacterium rectale RepID=D4JJX6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74886.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14817..16106)
DNA (1290bp) protein (430aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=4 Tax=Eubacterium RepID=C4ZH70_EUBR3
Seryl-tRNA synthetase {ECO:0000313|EMBL:CDC72280.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_1369_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16162..17403)
DNA (1242bp) protein (414aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBK93927.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBK93927.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Serine hydroxymethyltransferase n=2 Tax=Eubacterium rectale RepID=D4JJY0_9FIRM
L3_079_000M1_scaffold_1369_16
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17673..18134
DNA (462bp) protein (154aa)
Stage V sporulation AC SpoVAC n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TYJ6_9FIRM
Stage V sporulation AC SpoVAC {ECO:0000313|EMBL:CDC72976.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
SpoVA protein.
L3_079_000M1_scaffold_1369_17
unknown

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comp(18292..18519)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_079_000M1_scaffold_1369_18
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18541..18831)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XWK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA19010.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
cytoplasmic protein
L3_079_000M1_scaffold_1369_19
unknown

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comp(18854..19429)
DNA (576bp) protein (192aa)

This feature has no annotations

L3_079_000M1_scaffold_1369_20
unknown

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comp(19441..19644)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_079_000M1_scaffold_1369_21
unknown

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comp(19641..19856)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_079_000M1_scaffold_1369_22
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19877..20299)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZZP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41924.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L3_079_000M1_scaffold_1369_23
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20543..20731)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S2C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF67679.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_079_000M1_scaffold_1369_24
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20735..21157)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R6AL87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA41927.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L3_079_000M1_scaffold_1369_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21336..21701
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGR5_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74862.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_1369_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21793..22308
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79871.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_079_000M1_scaffold_1369_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22400..22672)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGR2_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74859.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Displaying 27 items

View Taxonomy