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L3_079_000M1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_156_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(147..1757)
DNA (1611bp) protein (537aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM81_9FIRM
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:CBK92916.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_079_000M1_scaffold_156_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1999..3207)
DNA (1209bp) protein (403aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.23)
UDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CBK91514.1}; EC=2.7.7.23 {ECO:0000313|EMBL:CBK91514.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
UDP-glucose pyrophosphorylase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0Z3_9FIRM
L3_079_000M1_scaffold_156_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3242..4459)
DNA (1218bp) protein (406aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Eubacterium rectale CAG:36 RepID=R6US87_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CDC73592.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
cell envelope-related function transcriptional attenuator common domain
L3_079_000M1_scaffold_156_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4461..4619)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T452_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91512.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_156_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4667..6397)
DNA (1731bp) protein (577aa)
Alpha-phosphoglucomutase {ECO:0000313|EMBL:CBK92920.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CBK92920.1};; EC=5.4.2.8 {ECO:0000313|EMBL:CBK92920.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Alpha-phosphoglucomutase n=3 Tax=Eubacterium RepID=D4JM85_9FIRM
L3_079_000M1_scaffold_156_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6509..6913)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGS9_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76351.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_156_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6995..8089)
DNA (1095bp) protein (365aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3D3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89923.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_156_8
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8246..9784)
DNA (1539bp) protein (513aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUU6_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF42337.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
N-acetylmuramidase/lysin
L3_079_000M1_scaffold_156_9
unknown

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comp(9800..9934)
DNA (135bp) protein (45aa)
NAD-dependent epimerase/dehydratase
L3_079_000M1_scaffold_156_10
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9970..10878)
DNA (909bp) protein (303aa)
Glycosyltransferase n=1 Tax=Roseburia sp. CAG:45 RepID=R6P0Z4_9FIRM
Glycosyltransferase {ECO:0000313|EMBL:CDC12161.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
glycosyltransferase
L3_079_000M1_scaffold_156_11
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10903..11256)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5EA42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX85642.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
membrane protein
L3_079_000M1_scaffold_156_12
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11249..11611)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5EC11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX85641.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L3_079_000M1_scaffold_156_13
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11614..12807)
DNA (1194bp) protein (398aa)
ATP-grasp domain protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5DZE7_9CLOT
ATP-grasp domain protein {ECO:0000313|EMBL:CCX85640.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
carbamoyl-phosphate synthase large subunit
L3_079_000M1_scaffold_156_14
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

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comp(12764..13759)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:460 RepID=R7IBN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48713.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
putative NDP-sugar dehydratase or epimerase
L3_079_000M1_scaffold_156_15
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13773..14900)
DNA (1128bp) protein (376aa)
dTDP-4-amino-4 6-dideoxy-D-glucose transaminase n=1 Tax=Roseburia sp. CAG:303 RepID=R7INB8_9FIRM
dTDP-4-amino-4 6-dideoxy-D-glucose transaminase {ECO:0000313|EMBL:CDE53026.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
L3_079_000M1_scaffold_156_16
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14929..16359)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JFF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29862.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L3_079_000M1_scaffold_156_17
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16477..18759)
DNA (2283bp) protein (761aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUU6_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDF42337.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
N-acetylmuramidase/lysin
L3_079_000M1_scaffold_156_18
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18761..19771)
DNA (1011bp) protein (337aa)
Acyltransferase n=1 Tax=Roseburia sp. CAG:182 RepID=R7R0F2_9FIRM
Acyltransferase {ECO:0000313|EMBL:CDF43393.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L3_079_000M1_scaffold_156_19
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19768..21108)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWJ1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KJW99069.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
polysaccharide pyruvyl transferase
L3_079_000M1_scaffold_156_20
unknown

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comp(21131..21853)
DNA (723bp) protein (241aa)

This feature has no annotations

L3_079_000M1_scaffold_156_21
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21875..24160)
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43392.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L3_079_000M1_scaffold_156_22
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(24176..24907)
DNA (732bp) protein (244aa)
ABC transporter related n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MLK7_CALBD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM59215.1}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320); (Anaerocellum thermophilum).;"
L3_079_000M1_scaffold_156_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24916..25692)
DNA (777bp) protein (259aa)
ABC-2 type transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHD9_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-2 type transporter
L3_079_000M1_scaffold_156_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(25706..26530)
DNA (825bp) protein (275aa)
Nucleoside-diphosphate-sugar epimerases-like n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3K4_BIFAA
nucleoside-diphosphate-sugar epimerase family protein
Nucleoside-diphosphate-sugar epimerases-like {ECO:0000313|EMBL:BAF40287.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_079_000M1_scaffold_156_25
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26644..28500)
DNA (1857bp) protein (619aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CNU3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG48563.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
Predicted glycosyltransferases
L3_079_000M1_scaffold_156_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28522..29502)
DNA (981bp) protein (327aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Eubacterium rectale M104/1 RepID=D4JMA3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK92938.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_156_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(29459..30349)
DNA (891bp) protein (297aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SA08_9BIFI
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADB10600.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_079_000M1_scaffold_156_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30370..32499)
DNA (2130bp) protein (710aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JMA4_9FIRM
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CBK92939.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_156_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32663..33313)
DNA (651bp) protein (217aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CBK92942.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CBK92942.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=2 Tax=Eubacterium RepID=D4JMA7_9FIRM
L3_079_000M1_scaffold_156_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33359..34342)
DNA (984bp) protein (328aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBK92943.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBK92943.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JMA8_9FIRM
Displaying items 1-30 of 108 in total

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