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L3_079_000M1_scaffold_195

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_195_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(58..1464)
DNA (1407bp) protein (469aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.35 2.1.1.-)
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:CBK93706.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK93706.1};; EC=2.1.1.35 {ECO:0000313|EMBL:CBK93706.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJA9_9FIRM
L3_079_000M1_scaffold_195_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1583..1897)
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6UFK5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC69542.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_195_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1998..4289)
DNA (2292bp) protein (764aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JJB1_9FIRM
L3_079_000M1_scaffold_195_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4464..5117
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8S3_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75154.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5146..5451)
DNA (306bp) protein (102aa)
TrpR-related protein YerC/YecD n=4 Tax=Eubacterium RepID=D4JJB3_9FIRM
TrpR-related protein YerC/YecD
Uncharacterized protein {ECO:0000313|EMBL:CDC69534.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_195_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5596..6450
DNA (855bp) protein (285aa)
CAAX amino terminal protease family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0G1_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBK91332.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_195_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6437..6904)
DNA (468bp) protein (156aa)
Predicted membrane protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0G0_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK91331.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_195_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6898..7956)
DNA (1059bp) protein (353aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBK91330.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBK91330.1};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Histidinol-phosphate aminotransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0F9_9FIRM
L3_079_000M1_scaffold_195_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8196..9563
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R8_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75149.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9754..11307)
DNA (1554bp) protein (518aa)
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0F7_9FIRM
L3_079_000M1_scaffold_195_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11357..12526)
DNA (1170bp) protein (390aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Galactokinase n=3 Tax=Eubacterium RepID=C4Z8R6_EUBR3
galactokinase
L3_079_000M1_scaffold_195_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12694..13803)
DNA (1110bp) protein (370aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Glycosyl hydrolase, family 53 n=2 Tax=Eubacterium rectale RepID=C4Z8R5_EUBR3
glycosyl hydrolase, family 53
L3_079_000M1_scaffold_195_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13911..16994)
DNA (3084bp) protein (1028aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0F4_9FIRM
L3_079_000M1_scaffold_195_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17126..17956)
DNA (831bp) protein (277aa)
Lactose transport system (Permease) n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R3_EUBR3
lactose transport system (permease)
Lactose transport system (Permease) {ECO:0000313|EMBL:ACR75144.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17949..18851)
DNA (903bp) protein (301aa)
Lactose transport system (Permease) n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R2_EUBR3
lactose transport system (permease)
Lactose transport system (Permease) {ECO:0000313|EMBL:ACR75143.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18938..20287)
DNA (1350bp) protein (450aa)
Putative sugar ABC transporter, periplasmic binding protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R1_EUBR3
putative sugar ABC transporter, periplasmic binding protein
Putative sugar ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ACR75142.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20509..21447)
DNA (939bp) protein (313aa)
L-rhamnose operon transcriptional activator n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8R0_EUBR3
L-rhamnose operon transcriptional activator
L-rhamnose operon transcriptional activator {ECO:0000313|EMBL:ACR75141.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21519..21737)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TB83_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91323.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_195_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21710..23569)
DNA (1860bp) protein (620aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8Q8_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75139.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_195_20
unknown

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24492..24608
DNA (117bp) protein (39aa)

This feature has no annotations

L3_079_000M1_scaffold_195_21
unknown

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comp(24586..24699)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_079_000M1_scaffold_195_22
unknown

Not on your lists

comp(24788..24910)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_079_000M1_scaffold_195_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25104..25877
DNA (774bp) protein (258aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0E9_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBK91320.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_195_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25890..26603
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TNM5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93726.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_195_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26711..27022)
DNA (312bp) protein (104aa)
Predicted transcriptional regulators n=2 Tax=Eubacterium RepID=D4JJD0_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK93727.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_195_26
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27023..27829)
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TNM0_9FIRM
Protein of unknown function (DUF1700).
Uncharacterized protein {ECO:0000313|EMBL:CBK93728.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_195_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28024..28905)
DNA (882bp) protein (294aa)
Galactose mutarotase and related enzymes n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0E7_9FIRM
Galactose mutarotase and related enzymes
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CBK91318.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_195_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29034..31373)
DNA (2340bp) protein (780aa)
Ferrous iron transport protein B n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8B4_EUBR3
Ferrous iron transport protein B {ECO:0000313|EMBL:ACR75131.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
ferrous iron transport protein B
L3_079_000M1_scaffold_195_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31418..32692)
DNA (1275bp) protein (425aa)
Signal transduction histidine kinase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0E5_9FIRM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:CBK91316.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_195_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32731..33402)
DNA (672bp) protein (224aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Eubacterium RepID=D4JJD5_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK93732.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Displaying items 1-30 of 72 in total

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