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L3_079_000M1_scaffold_826

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_826_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1739..2782
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6ULR2_9FIRM
L3_079_000M1_scaffold_826_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3236..4261
DNA (1026bp) protein (342aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.272)
Lactate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CBK94438.1}; EC=1.1.1.272 {ECO:0000313|EMBL:CBK94438.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Lactate dehydrogenase and related dehydrogenases n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLE1_9FIRM
L3_079_000M1_scaffold_826_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4343..6280
DNA (1938bp) protein (646aa)
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLE0_9FIRM
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily {ECO:0000313|EMBL:CBK94437.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L3_079_000M1_scaffold_826_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6345..7010
DNA (666bp) protein (222aa)
Predicted phosphatase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TPH0_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Predicted phosphatase {ECO:0000313|EMBL:CDC71719.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_826_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7029..9050
DNA (2022bp) protein (674aa)
PRD/PTS system IIA 2 domain protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZB72_EUBR3
PRD/PTS system IIA 2 domain protein {ECO:0000313|EMBL:ACR74147.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
PRD/PTS system IIA 2 domain protein
L3_079_000M1_scaffold_826_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9261..9524
DNA (264bp) protein (88aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Eubacterium RepID=D4JLD7_9FIRM
Phosphotransferase System HPr (HPr) Family
Uncharacterized protein {ECO:0000313|EMBL:ACR74148.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9555..11255
DNA (1701bp) protein (567aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Eubacterium rectale CAG:36 PF3_9FIRM">RepID=R6TPF3_9FIRM
L3_079_000M1_scaffold_826_8
unknown

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11603..11827
DNA (225bp) protein (75aa)

This feature has no annotations

L3_079_000M1_scaffold_826_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11854..12264
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TE29_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74152.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12280..13605
DNA (1326bp) protein (442aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLC8_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CBK94425.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_826_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13614..14276
DNA (663bp) protein (221aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1J6_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK89286.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_826_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14266..15534
DNA (1269bp) protein (423aa)
Transmembrane protein Vexp3 n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZB81_EUBR3
transmembrane protein Vexp3
Transmembrane protein Vexp3 {ECO:0000313|EMBL:ACR74156.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15598..16293
DNA (696bp) protein (232aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1J8_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK89288.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_826_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16244..17479
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZB83_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR74158.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17537..17983
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JLC5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK94422.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_826_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18558..18773
DNA (216bp) protein (72aa)
Protein translocase subunit secE/sec61 gamma n=4 Tax=Eubacterium RepID=D4JLC3_9FIRM
protein translocase subunit secE/sec61 gamma
Uncharacterized protein {ECO:0000313|EMBL:ACR74163.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18792..19310
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=4 Tax=Eubacterium RepID=C4ZB89_EUBR3
transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_18
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19325..19750
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=3 Tax=Eubacterium RepID=D4JLC1_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_079_000M1_scaffold_826_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19873..20568
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=3 Tax=Eubacterium RepID=C4ZB91_EUBR3
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_20
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20859..21410
DNA (552bp) protein (184aa)
50S ribosomal protein L10 n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TUR4_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
50S ribosomal protein L10
L3_079_000M1_scaffold_826_21
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21471..21845
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=4 Tax=Eubacterium RepID=C4ZB93_EUBR3
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_079_000M1_scaffold_826_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22290..26231
DNA (3942bp) protein (1314aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK89296.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBK89296.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E1K6_9FIRM
L3_079_000M1_scaffold_826_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26250..30098
DNA (3849bp) protein (1283aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZB95_EUBR3
DNA-directed RNA polymerase subunit beta'
L3_079_000M1_scaffold_826_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30307..30726
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=4 Tax=Eubacterium RepID=C4ZB96_EUBR3
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_079_000M1_scaffold_826_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30898..31368
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Eubacterium rectale CAG:36 RepID=R6ULG9_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
30S ribosomal protein S7
L3_079_000M1_scaffold_826_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31472..33589
DNA (2118bp) protein (706aa)
Elongation factor G n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TUP7_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
elongation factor G
L3_079_000M1_scaffold_826_27
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33801..33890
DNA (90bp) protein (30aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=3 Tax=Clostridium RepID=D6DGS9_CLOSC
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Displaying 27 items

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