ggKbase home page

L3_079_000M1_scaffold_671

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_671_1
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303..1274)
DNA (972bp) protein (324aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
ADP-glyceromanno-heptose 6-epimerase n=2 Tax=Bilophila RepID=E5YBG8_BILWA
nucleoside-diphosphate-sugar epimerases
L3_079_000M1_scaffold_671_2
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1335..2483)
DNA (1149bp) protein (383aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Glutamate 5-kinase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8S9_9DELT
glutamate 5-kinase
L3_079_000M1_scaffold_671_3
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2833..3939)
DNA (1107bp) protein (369aa)
GTPase Obg n=2 Tax=Bilophila RepID=E5YBG6_BILWA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
GTP-binding protein Obg/CgtA
L3_079_000M1_scaffold_671_4
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3965..4363)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8S7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43153.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_079_000M1_scaffold_671_5
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4443..4565
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8S6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43152.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_079_000M1_scaffold_671_6
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4586..4867)
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=2 Tax=Bilophila RepID=E5YBG4_BILWA
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
rpmA; 50S ribosomal protein L27
L3_079_000M1_scaffold_671_7
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4893..5201)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=2 Tax=Bilophila RepID=E5YBG3_BILWA
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
50S ribosomal protein L21
L3_079_000M1_scaffold_671_8
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5710..5997
DNA (288bp) protein (96aa)
10 kDa chaperonin n=2 Tax=Bilophila RepID=E5YBG2_BILWA
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
groES; co-chaperonin GroES
L3_079_000M1_scaffold_671_9
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6064..7707
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=2 Tax=Bilophila RepID=E5YBG1_BILWA
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
groEL; chaperonin GroEL
L3_079_000M1_scaffold_671_10
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8094..8660
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8S0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43146.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
isochorismatase hydrolase
L3_079_000M1_scaffold_671_11
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8937..9884
DNA (948bp) protein (316aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Release factor glutamine methyltransferase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8R9_9DELT
HemK family modification methylase
L3_079_000M1_scaffold_671_12
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10015..10932
DNA (918bp) protein (306aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBF8_BILWA
L3_079_000M1_scaffold_671_13
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11096..11542
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8R7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43158.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
N-acetyltransferase GCN5
L3_079_000M1_scaffold_671_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11568..12134
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBF6_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV42668.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
HD superfamily hydrolase
L3_079_000M1_scaffold_671_15
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12330..12821)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5YBF5_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW43156.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_079_000M1_scaffold_671_16
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12943..15012
DNA (2070bp) protein (690aa)
DNA mismatch repair protein MutL n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBF4_BILWA
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
DNA mismatch repair protein MutL
L3_079_000M1_scaffold_671_17
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15085..16596)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBF3_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV42665.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
L3_079_000M1_scaffold_671_18
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16916..19480)
DNA (2565bp) protein (855aa)
Protein translocase subunit SecA n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBF2_BILWA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
preprotein translocase subunit SecA
L3_079_000M1_scaffold_671_19
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20008..21024)
DNA (1017bp) protein (339aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8R0_9DELT
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EGW43175.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypE; hydrogenase expression/formation protein
L3_079_000M1_scaffold_671_20
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21037..22491)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5YBF0_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW43174.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
major facilitator superfamily protein
L3_079_000M1_scaffold_671_21
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22606..23088)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43173.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
acetyltransferase (GNAT) family protein
L3_079_000M1_scaffold_671_22
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23288..24073)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43172.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
ApbE family lipoprotein
L3_079_000M1_scaffold_671_23
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24184..25086
DNA (903bp) protein (301aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q6_9DELT
L3_079_000M1_scaffold_671_24
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25231..25866
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43170.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
NADPH-dependent FMN reductase
L3_079_000M1_scaffold_671_25
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26075..26704
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43169.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
phosphoribosyltransferase
L3_079_000M1_scaffold_671_26
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26729..27616
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43168.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_079_000M1_scaffold_671_27
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27620..28285
DNA (666bp) protein (222aa)
chloramphenicol O-acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q2_9DELT
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EGW43167.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_079_000M1_scaffold_671_28
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28432..29388
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43166.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Tim44-like domain-containing protein
L3_079_000M1_scaffold_671_29
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29713..30333)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V8Q0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW43165.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
thiamine biosynthesis protein ThiF
L3_079_000M1_scaffold_671_30
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30490..31659)
DNA (1170bp) protein (390aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBE0_BILWA
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EFV42677.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
thiH; thiamine biosynthesis protein ThiH
Displaying items 1-30 of 43 in total

View Taxonomy