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L3_079_000M1_scaffold_5756

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_5756_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..223
DNA (222bp) protein (74aa)
50S ribosomal protein L18 n=2 Tax=Dorea RepID=R7FZ25_9FIRM
Ribosomal protein L18 {ECO:0000313|EMBL:EDM62414.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
LSU ribosomal protein L18P
L3_079_000M1_scaffold_5756_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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238..747
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=2 Tax=Dorea RepID=A6BIR9_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
SSU ribosomal protein S5P
L3_079_000M1_scaffold_5756_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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762..941
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=2 Tax=Dorea RepID=A6BIS0_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
LSU ribosomal protein L30P
L3_079_000M1_scaffold_5756_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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971..1411
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Dorea RepID=A6BIS1_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LSU ribosomal protein L15P
L3_079_000M1_scaffold_5756_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1411..2727
DNA (1317bp) protein (439aa)
Protein translocase subunit SecY n=2 Tax=Dorea RepID=A6BIS2_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
protein translocase subunit secY/sec61 alpha
L3_079_000M1_scaffold_5756_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2788..3432
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=2 Tax=Dorea RepID=R7FZ19_9FIRM
L3_079_000M1_scaffold_5756_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3437..4201
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Dorea RepID=A6BIS4_9FIRM
L3_079_000M1_scaffold_5756_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4227..4475
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20482.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_5756_9
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4488..4706
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=17 Tax=Clostridiales RepID=A6BIS6_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
translation initiation factor IF-1
L3_079_000M1_scaffold_5756_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5260..5628
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Dorea RepID=A6BIS7_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
30S ribosomal protein S13
L3_079_000M1_scaffold_5756_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5661..5921
DNA (261bp) protein (87aa)
30S ribosomal protein S11 n=4 Tax=Dorea RepID=A6BIS8_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
30S ribosomal protein S11
Displaying 11 items

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