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L3_079_000M1_scaffold_1399

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1399_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(387..1016)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS37_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
L3_079_000M1_scaffold_1399_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1377..2996)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIW4_9FIRM
L3_079_000M1_scaffold_1399_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3104..4006)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62459.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_1399_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4150..6306)
DNA (2157bp) protein (719aa)
Tex-like protein N-terminal domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIW2_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:EDM62458.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Transcriptional accessory protein
L3_079_000M1_scaffold_1399_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6513..7115
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=2 Tax=Dorea RepID=A6BIW1_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDE20444.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Transcriptional regulator
L3_079_000M1_scaffold_1399_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7179..8099
DNA (921bp) protein (307aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EDM62456.1}; EC=2.7.1.- {ECO:0000313|EMBL:EDM62456.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIW0_9FIRM
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_079_000M1_scaffold_1399_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8127..8948
DNA (822bp) protein (274aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIV9_9FIRM
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EDM62455.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Glycerophosphoryl diester phosphodiesterase
L3_079_000M1_scaffold_1399_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9067..9735
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62454.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
PAP2 superfamily.
L3_079_000M1_scaffold_1399_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10012..10401)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62452.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_079_000M1_scaffold_1399_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10398..10664)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62451.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_079_000M1_scaffold_1399_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10720..11124)
DNA (405bp) protein (135aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDM62450.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDM62450.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIV4_9FIRM
N-acetylmuramoyl-L-alanine amidase
L3_079_000M1_scaffold_1399_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11195..12349)
DNA (1155bp) protein (385aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=2 Tax=Dorea RepID=A6BIU7_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDE20449.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_1399_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12786..13199
DNA (414bp) protein (138aa)
prdA; D-proline reductase proprotein prdA [Contains: D-proline reductase subunit beta (D-proline reductase 45 kDa subunit); D-proline reductase subunit alpha (D-proline reductase 23 kDa subunit)] (EC:1.21.4.1)
D-proline reductase PrdA proprotein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYZ3_9FIRM
D-proline reductase PrdA proprotein {ECO:0000313|EMBL:CDE20454.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_1399_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13293..14831)
DNA (1539bp) protein (513aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIU5_9FIRM
L3_079_000M1_scaffold_1399_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14917..15138)
DNA (222bp) protein (74aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 1 n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZW5_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 1 {ECO:0000313|EMBL:CDE20460.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
PTS system glucose subfamily transporter subunit IIA
L3_079_000M1_scaffold_1399_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15465..16484
DNA (1020bp) protein (340aa)
Transcriptional regulator LacI family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G379_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDE20462.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator, LacI family
L3_079_000M1_scaffold_1399_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16602..17348)
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=2 Tax=Dorea RepID=R7FZX0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE20465.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC transporter
L3_079_000M1_scaffold_1399_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17338..18027)
DNA (690bp) protein (230aa)
ABC transporter, permease protein n=2 Tax=Dorea RepID=A6BIU1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62437.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_079_000M1_scaffold_1399_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18050..18835)
DNA (786bp) protein (262aa)
Amino acid ABC transporter, amino acid-binding/permease family protein n=2 Tax=Dorea RepID=A6BIU0_9FIRM
Amino acid ABC transporter amino acid-binding/permease family protein {ECO:0000313|EMBL:CDE20467.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
amino acid ABC transporter permease
L3_079_000M1_scaffold_1399_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18970..19797)
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=2 Tax=Dorea RepID=A6BIT9_9FIRM
L3_079_000M1_scaffold_1399_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19813..20643)
DNA (831bp) protein (277aa)
Cof-like hydrolase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIT8_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EDM62434.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
HAD-superfamily hydrolase, subfamily IIB
L3_079_000M1_scaffold_1399_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20633..21214)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20470.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_1399_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21413..22576
DNA (1164bp) protein (388aa)
Cell Wall Hydrolase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0L4_9FIRM
Cell Wall Hydrolase {ECO:0000313|EMBL:CDE20471.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1399_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22707..23462)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20472.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Phosphotransferase enzyme family.
L3_079_000M1_scaffold_1399_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23795..26416)
DNA (2622bp) protein (874aa)
acetaldehyde dehydrogenase/alcohol dehydrogenase AdhE (EC:1.2.1.10 1.1.1.1)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G122_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_1399_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26548..28284)
DNA (1737bp) protein (579aa)
Hydrogenase, Fe-only {ECO:0000313|EMBL:EDM62429.1}; EC=1.12.-.- {ECO:0000313|EMBL:EDM62429.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenase, Fe-only n=2 Tax=Dorea RepID=A6BIT3_9FIRM
L3_079_000M1_scaffold_1399_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28278..30110)
DNA (1833bp) protein (611aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Dorea RepID=A6BIT2_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDE20475.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L3_079_000M1_scaffold_1399_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30468..31004)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=2 Tax=Dorea RepID=A6BIT1_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LSU ribosomal protein L17P
L3_079_000M1_scaffold_1399_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31095..32054)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DNA-directed RNA polymerase subunit alpha n=2 Tax=Dorea RepID=R7G393_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_079_000M1_scaffold_1399_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32084..32677)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=2 Tax=Dorea RepID=A6BIS9_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
SSU ribosomal protein S4P
Displaying items 1-30 of 31 in total

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