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L3_079_000M1_scaffold_1646

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1646_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..845
DNA (843bp) protein (281aa)
Putative Na/Pi-cotransporter II-like protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDG2_9FIRM
Putative Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EDM64479.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Na+/phosphate symporter
L3_079_000M1_scaffold_1646_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(899..1768)
DNA (870bp) protein (290aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS06_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE17411.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
AraC-type DNA-binding domain-containing proteins
L3_079_000M1_scaffold_1646_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1979..4237
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
malP; Maltodextrin phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDG5_9FIRM
L3_079_000M1_scaffold_1646_4
unknown

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comp(4386..4796)
DNA (411bp) protein (137aa)

This feature has no annotations

L3_079_000M1_scaffold_1646_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4967..5680)
DNA (714bp) protein (238aa)
Response regulator receiver domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDG7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDM64484.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
winged helix family two component transcriptional regulator
L3_079_000M1_scaffold_1646_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5683..6777)
DNA (1095bp) protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRD7_9FIRM
L3_079_000M1_scaffold_1646_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6954..8153
DNA (1200bp) protein (400aa)
Metallo-beta-lactamase domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS11_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDE17416.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
flavodoxin/nitric oxide synthase
L3_079_000M1_scaffold_1646_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8234..9565
DNA (1332bp) protein (444aa)
Glutamine synthetase, type I {ECO:0000313|EMBL:EDM64487.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDM64487.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Glutamine synthetase, type I n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDH0_9FIRM
glutamine synthetase, type I
L3_079_000M1_scaffold_1646_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9623..10171
DNA (549bp) protein (183aa)
ANTAR domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSB4_9FIRM
ANTAR domain protein {ECO:0000313|EMBL:CDE17418.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Response regulator with putative antiterminator output domain
L3_079_000M1_scaffold_1646_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10201..11049
DNA (849bp) protein (283aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQ43_9FIRM
L3_079_000M1_scaffold_1646_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11054..12268
DNA (1215bp) protein (405aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
LL-diaminopimelate aminotransferase n=2 Tax=Dorea RepID=A6BDH3_9FIRM
L,L-diaminopimelate aminotransferase
L3_079_000M1_scaffold_1646_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12445..13245)
DNA (801bp) protein (267aa)
Transcriptional regulator, MerR family n=2 Tax=Dorea RepID=A6BDH4_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDE17421.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
regulatory protein MerR
L3_079_000M1_scaffold_1646_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13264..13407)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17422.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_1646_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13514..14833
DNA (1320bp) protein (440aa)
MATE efflux family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSB7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE17423.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
putative drug/sodium antiporter, MATE family
L3_079_000M1_scaffold_1646_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14898..15188
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BDH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17424.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Pyridoxamine 5'-phosphate oxidase.
L3_079_000M1_scaffold_1646_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15934..17055
DNA (1122bp) protein (374aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EDM64494.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EDM64494.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDH7_9FIRM
Methionine synthase II (cobalamin-independent)
L3_079_000M1_scaffold_1646_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17171..17692)
DNA (522bp) protein (174aa)
Nitroreductase family protein n=2 Tax=Dorea RepID=A6BDH8_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:CDE17426.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Nitroreductase
L3_079_000M1_scaffold_1646_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17770..18150)
DNA (381bp) protein (127aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDH9_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EDM64496.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Mn-dependent transcriptional regulator
L3_079_000M1_scaffold_1646_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18404..18613
DNA (210bp) protein (70aa)
FeoA domain protein n=2 Tax=Dorea RepID=A6BDI0_9FIRM
FeoA domain protein {ECO:0000313|EMBL:EDM64497.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Fe2+ transport system protein A
L3_079_000M1_scaffold_1646_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18671..18889
DNA (219bp) protein (73aa)
FeoA domain protein n=2 Tax=Dorea RepID=A6BDI1_9FIRM
FeoA domain protein {ECO:0000313|EMBL:CDE17431.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Fe2+ transport system protein A
L3_079_000M1_scaffold_1646_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18960..19175
DNA (216bp) protein (72aa)
Ferrous iron transport protein B n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDI2_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EDM64499.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
small GTP-binding protein domain
Displaying 21 items

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