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L3_079_000M1_scaffold_1789

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1789_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..98
DNA (96bp) protein (32aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Lachnospiraceae RepID=C0B5T7_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_079_000M1_scaffold_1789_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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315..1229
DNA (915bp) protein (305aa)
Kinase, PfkB family n=2 Tax=Dorea RepID=A6BCN3_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDE16787.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
putative kinase
L3_079_000M1_scaffold_1789_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1269..2087
DNA (819bp) protein (273aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQB1_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE16786.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
AraC-type DNA-binding domain-containing proteins
L3_079_000M1_scaffold_1789_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2233..2601
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE16785.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1789_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2822..4306
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FND1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE16784.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L-fucose isomerase and related proteins
L3_079_000M1_scaffold_1789_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4377..5840
DNA (1464bp) protein (488aa)
Xylulokinase {ECO:0000313|EMBL:EDM64205.1}; EC=2.7.1.17 {ECO:0000313|EMBL:EDM64205.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCN8_9FIRM
L3_079_000M1_scaffold_1789_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6060..7319
DNA (1260bp) protein (420aa)
Putative permease n=2 Tax=Dorea RepID=A6BCN9_9FIRM
Putative permease {ECO:0000313|EMBL:CDE16782.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
uracil-xanthine permease
L3_079_000M1_scaffold_1789_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7297..8763)
DNA (1467bp) protein (489aa)
Glycosyl hydrolase, family 43 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCP0_9FIRM
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EDM64207.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative beta-xylosidase
L3_079_000M1_scaffold_1789_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8885..9973
DNA (1089bp) protein (363aa)
Transcriptional regulator LacI family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPM5_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDE16780.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator, LacI family
L3_079_000M1_scaffold_1789_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10281..12230
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FNC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE16779.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1789_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12297..13667
DNA (1371bp) protein (457aa)
Arabinose-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCP3_9FIRM
Arabinose-binding protein {ECO:0000313|EMBL:EDM64210.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_079_000M1_scaffold_1789_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13764..14648
DNA (885bp) protein (295aa)
L-arabinose transport system permease protein AraP n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSU5_9FIRM
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:CDE16777.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_079_000M1_scaffold_1789_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14650..15498
DNA (849bp) protein (283aa)
ABC transporter permease protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQA3_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDE16776.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_079_000M1_scaffold_1789_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15525..17039
DNA (1515bp) protein (505aa)
Alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase domain protein n=2 Tax=Dorea RepID=A6BCP6_9FIRM
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EDM64213.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_079_000M1_scaffold_1789_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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17053..17682
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21766.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted integral membrane protein
Displaying 15 items

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