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L3_079_000M1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_97_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPV6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ENZ05338.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_079_000M1_scaffold_97_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(598..2007)
DNA (1410bp) protein (470aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1C3_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDE20965.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_97_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2091..3020)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20964.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_97_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3211..3456)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20963.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_97_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3607..5853)
DNA (2247bp) protein (749aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGJ9_9FIRM
L3_079_000M1_scaffold_97_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5882..6319)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G281_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20848.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_97_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6541..8442)
DNA (1902bp) protein (634aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G4B1_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE20847.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_97_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8444..10192)
DNA (1749bp) protein (583aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1Q6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE20846.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_97_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10259..10711)
DNA (453bp) protein (151aa)
Transcriptional regulator MarR family n=2 Tax=Dorea RepID=R7G136_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDE20845.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Transcriptional regulators
L3_079_000M1_scaffold_97_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10930..11583
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G051_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20844.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Domain of unknown function (DUF1836).
L3_079_000M1_scaffold_97_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11615..11929)
DNA (315bp) protein (105aa)
TrpR family protein YerC/YecD n=2 Tax=Dorea RepID=A6BGK5_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CDE20843.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
TrpR-related protein YerC/YecD
L3_079_000M1_scaffold_97_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11994..12719)
DNA (726bp) protein (242aa)
Histidinol phosphate phosphatase HisJ family n=2 Tax=Dorea RepID=A6BGK6_9FIRM
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EDM63109.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Histidinol phosphatase and related hydrolases of the PHP family
L3_079_000M1_scaffold_97_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12965..13213
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20841.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_97_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13324..14316
DNA (993bp) protein (331aa)
L-asparaginase, type I n=2 Tax=Dorea RepID=A6BGK8_9FIRM
L-asparaginase type I {ECO:0000313|EMBL:CDE20840.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
type I L-asparaginase
L3_079_000M1_scaffold_97_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14662..14919)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63113.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_97_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15315..16667)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=2 Tax=Dorea RepID=A6BGL2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE20831.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
putative efflux protein, MATE family
L3_079_000M1_scaffold_97_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16667..17956)
DNA (1290bp) protein (430aa)
UPF0597 protein DORLON_01435 n=2 Tax=Dorea RepID=A6BGL3_9FIRM
UPF0597 protein DORLON_01435 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_97_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17975..18931)
DNA (957bp) protein (319aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=2 Tax=Dorea RepID=A6BGL4_9FIRM
L3_079_000M1_scaffold_97_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19339..19629)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63120.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_97_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19663..20025)
DNA (363bp) protein (121aa)
Glyoxalase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGL8_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EDM63121.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Lactoylglutathione lyase and related lyases
L3_079_000M1_scaffold_97_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20094..20510)
DNA (417bp) protein (139aa)
Oxidoreductase n=2 Tax=Dorea RepID=A6BGL9_9FIRM
Oxidoreductase {ECO:0000313|EMBL:CDE20820.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
C_GCAxxG_C_C family probable redox protein
L3_079_000M1_scaffold_97_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20963..22360)
DNA (1398bp) protein (466aa)
Transporter n=2 Tax=Dorea RepID=A6BGM1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
sodium:neurotransmitter symporter family protein
L3_079_000M1_scaffold_97_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22493..22714)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G258_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20818.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type multidrug transport system, ATPase and permease components
L3_079_000M1_scaffold_97_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22931..23344)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G489_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20817.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Transcriptional regulator
L3_079_000M1_scaffold_97_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23498..24586
DNA (1089bp) protein (363aa)
NMT1/THI5-like protein n=2 Tax=Dorea RepID=A6BGM4_9FIRM
NMT1/THI5-like protein {ECO:0000313|EMBL:CDE20816.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L3_079_000M1_scaffold_97_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24747..25250)
DNA (504bp) protein (168aa)
CarD-like protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGM5_9FIRM
CarD-like protein {ECO:0000313|EMBL:EDM63128.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Transcriptional regulators, similar to M. xanthus CarD
L3_079_000M1_scaffold_97_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25513..27333)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G024_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20814.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Alcohol acetyltransferase.
L3_079_000M1_scaffold_97_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27365..28327)
DNA (963bp) protein (321aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGM7_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EDM63130.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
alpha/beta hydrolase fold-3
L3_079_000M1_scaffold_97_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28327..29064)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20812.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted integral membrane protein
L3_079_000M1_scaffold_97_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29082..30920)
DNA (1839bp) protein (613aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1M6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE20811.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ATPase components of ABC transporters with duplicated ATPase domains
Displaying items 1-30 of 105 in total

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