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L3_079_000M1_scaffold_431

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_431_1
unknown

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2..100
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SPV6_CLOSY
L3_079_000M1_scaffold_431_2
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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315..2417
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FH59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00092.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
N-6 DNA methylase
L3_079_000M1_scaffold_431_3
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2433..3668
DNA (1236bp) protein (412aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Putative type I site-specific restriction-modification system S subunit n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GJ85_9FIRM
Putative type I site-specific restriction-modification system S subunit {ECO:0000313|EMBL:CCY17293.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
L3_079_000M1_scaffold_431_4
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3668..4426
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GNJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY17294.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
molecular chaperone Tir
L3_079_000M1_scaffold_431_5
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4440..7511
DNA (3072bp) protein (1024aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RVH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74769.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
type III restriction protein res subunit
L3_079_000M1_scaffold_431_6
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7527..9923
DNA (2397bp) protein (799aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D2D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74415.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
5-methylcytosine-specific restriction enzyme B
L3_079_000M1_scaffold_431_7
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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9920..10990
DNA (1071bp) protein (357aa)
McrBC 5-methylcytosine restriction system component n=1 Tax=Dorea sp. CAG:105 RepID=R5DC54_9FIRM
McrBC 5-methylcytosine restriction system component {ECO:0000313|EMBL:CCX74412.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
McrBC 5-methylcytosine restriction system component
L3_079_000M1_scaffold_431_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11062..12108
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38755.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Virulence protein
L3_079_000M1_scaffold_431_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12556..13077
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BGI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20967.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_431_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13149..14495
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGI1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM63084.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_431_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14551..15072
DNA (522bp) protein (174aa)
PAP2 family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0H1_9FIRM
PAP2 family protein {ECO:0000313|EMBL:CDE20969.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Membrane-associated phospholipid phosphatase
L3_079_000M1_scaffold_431_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15103..16260)
DNA (1158bp) protein (386aa)
ABC-2 type transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGH9_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EDM63082.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type multidrug transport system, permease component
L3_079_000M1_scaffold_431_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16247..17389)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G204_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20971.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-2 type transporter.
L3_079_000M1_scaffold_431_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17404..18336)
DNA (933bp) protein (311aa)
ABC transporter, ATP-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGH7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM63080.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type multidrug transport system, ATPase component
L3_079_000M1_scaffold_431_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18507..19901
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2T7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDE21485.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_431_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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19903..20850
DNA (948bp) protein (316aa)
Putative ornithine cyclodeaminase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGH5_9FIRM
Putative ornithine cyclodeaminase {ECO:0000313|EMBL:EDM63078.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ornithine cyclodeaminase
L3_079_000M1_scaffold_431_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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20855..21232
DNA (378bp) protein (126aa)
Putative endoribonuclease L-PSP n=2 Tax=Dorea RepID=A6BGH4_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDM63077.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
endoribonuclease L-PSP, putative
L3_079_000M1_scaffold_431_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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21238..22071
DNA (834bp) protein (278aa)
Nucleotide-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G624_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDE21482.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ATPases involved in chromosome partitioning
L3_079_000M1_scaffold_431_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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22532..23779
DNA (1248bp) protein (416aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glyA; Serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGH2_9FIRM
L3_079_000M1_scaffold_431_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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23848..24936
DNA (1089bp) protein (363aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
gcvT; Aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGH1_9FIRM
L3_079_000M1_scaffold_431_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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25052..25432
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGH0_9FIRM
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
gcvH; glycine cleavage system protein H
L3_079_000M1_scaffold_431_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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25467..26786
DNA (1320bp) protein (440aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glycine dehydrogenase (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGG9_9FIRM
L3_079_000M1_scaffold_431_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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26780..28204
DNA (1425bp) protein (475aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGG8_9FIRM
L3_079_000M1_scaffold_431_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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28310..29308
DNA (999bp) protein (333aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGG7_9FIRM
hypothetical protein
L3_079_000M1_scaffold_431_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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29457..30902
DNA (1446bp) protein (482aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BGG6_9FIRM
dihydrolipoamide dehydrogenase
L3_079_000M1_scaffold_431_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30993..32783)
DNA (1791bp) protein (597aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1 4-alpha-glucan branching enzyme n=1 Tax=Dorea longicatena CAG:42 RepID=R7FV77_9FIRM
L3_079_000M1_scaffold_431_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32965..33522
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17623.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_431_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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33519..35885
DNA (2367bp) protein (789aa)
DEAD2 domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKL8_9FIRM
DEAD2 domain protein {ECO:0000313|EMBL:EDM61773.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Rad3-related DNA helicases
L3_079_000M1_scaffold_431_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36059..36937)
DNA (879bp) protein (293aa)
LysR substrate binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKL7_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDM61772.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Transcriptional regulator
L3_079_000M1_scaffold_431_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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37047..37748
DNA (702bp) protein (234aa)
TIGR01906 family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0U7_9FIRM
TIGR01906 family protein {ECO:0000313|EMBL:CDE21094.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
integral membrane protein TIGR01906
Displaying items 1-30 of 43 in total

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