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L3_079_000M1_scaffold_706

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_706_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62097.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_706_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(341..460)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62096.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_079_000M1_scaffold_706_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(746..1489)
DNA (744bp) protein (248aa)
YibE/F-like protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQU3_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:CDE17210.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
YibE/F-like protein.
L3_079_000M1_scaffold_706_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1489..2625)
DNA (1137bp) protein (379aa)
YibE/F-like protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTZ7_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:CDE17207.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted multitransmembrane protein
L3_079_000M1_scaffold_706_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2646..3218)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17205.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_706_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3473..3892)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62088.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Fe2+/Zn2+ uptake regulation proteins
L3_079_000M1_scaffold_706_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4021..4605)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62087.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Cytidylate kinase
L3_079_000M1_scaffold_706_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4619..5980)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=2 Tax=Dorea RepID=A6BJK3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM62086.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative efflux protein, MATE family
L3_079_000M1_scaffold_706_9
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(6244..6741)
DNA (498bp) protein (166aa)
Rubrerythrin n=2 Tax=Coprococcus RepID=D5HFT1_9FIRM
Rubrerythrin
Rubredoxin {ECO:0000313|EMBL:CDB99452.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L3_079_000M1_scaffold_706_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6748..7368)
DNA (621bp) protein (207aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=2 Tax=Dorea RepID=A6BJJ6_9FIRM
6-O-methylguanine DNA methyltransferase DNA binding domain protein {ECO:0000313|EMBL:CDE17188.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
O-6-methylguanine DNA methyltransferase
L3_079_000M1_scaffold_706_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7552..8439)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJJ5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDM62078.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Putative transcriptional regulator (LysR family)
L3_079_000M1_scaffold_706_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8628..9674
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62077.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted membrane protein
L3_079_000M1_scaffold_706_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9826..10677)
DNA (852bp) protein (284aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJJ3_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_079_000M1_scaffold_706_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10753..11397)
DNA (645bp) protein (215aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:3.5.4.9 4.3.1.4)
Formiminotransferase-cyclodeaminase n=2 Tax=Dorea RepID=A6BJJ2_9FIRM
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:CDE17183.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_706_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11565..11921)
DNA (357bp) protein (119aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8S1N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13545.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_079_000M1_scaffold_706_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12108..12860)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17182.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted permeases
L3_079_000M1_scaffold_706_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12944..13168)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VX75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35507.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Predicted membrane protein
L3_079_000M1_scaffold_706_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13263..14228)
DNA (966bp) protein (322aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Dorea longicatena CAG:42 RepID=R7FPE8_9FIRM
L3_079_000M1_scaffold_706_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14212..16158)
DNA (1947bp) protein (649aa)
Glycosyl hydrolase family 2 TIM barrel domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRM6_9FIRM
Glycosyl hydrolase family 2 TIM barrel domain protein {ECO:0000313|EMBL:CDE17173.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
glycoside hydrolase family protein
L3_079_000M1_scaffold_706_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16226..17023)
DNA (798bp) protein (266aa)
Pentapeptide repeat protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTW3_9FIRM
Pentapeptide repeat protein {ECO:0000313|EMBL:CDE17172.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
pentapeptide repeat-containing protein
L3_079_000M1_scaffold_706_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17108..18169)
DNA (1062bp) protein (354aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=2 Tax=Dorea RepID=R7FQP5_9FIRM
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CDE17170.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_706_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18352..19440)
DNA (1089bp) protein (363aa)
Putative chaperone protein DnaJ n=2 Tax=Dorea RepID=A6BKD1_9FIRM
Putative chaperone protein DnaJ {ECO:0000313|EMBL:CDE17169.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_079_000M1_scaffold_706_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19664..20116)
DNA (453bp) protein (151aa)
Hsp20/alpha crystallin family protein n=2 Tax=Dorea RepID=A6BKD2_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDE17168.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
heat shock protein Hsp20
L3_079_000M1_scaffold_706_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20534..21148)
DNA (615bp) protein (205aa)
Integrase n=1 Tax=Clostridium bolteae 90A5 RepID=R0C9G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFV19670.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000M1_scaffold_706_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21133..22215)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77682.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_079_000M1_scaffold_706_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22540..23898
DNA (1359bp) protein (453aa)
MATE efflux family protein n=2 Tax=Blautia RepID=A5ZWQ7_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL26181.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_079_000M1_scaffold_706_27
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24228..24575)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7DCT5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS25501.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_079_000M1_scaffold_706_28
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25094..25477)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FRA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17166.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_079_000M1_scaffold_706_29
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25434..25748)
DNA (315bp) protein (105aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q2L2_ACIIR
hypothetical protein
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERL20130.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_079_000M1_scaffold_706_30
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26038..26505)
DNA (468bp) protein (156aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKD5_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:EDM61823.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
Displaying items 1-30 of 40 in total

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