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L3_079_000M1_scaffold_951

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_951_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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1120..3687
DNA (2568bp) protein (856aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB9_9FIRM
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDM62654.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_079_000M1_scaffold_951_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3678..4835
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62653.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted permease
L3_079_000M1_scaffold_951_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4885..5505)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20606.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
nucleoside recognition domain containing protein
L3_079_000M1_scaffold_951_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5691..6218
DNA (528bp) protein (176aa)
Transporter gate domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3L5_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:CDE20607.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized membrane protein
L3_079_000M1_scaffold_951_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6255..6992)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62650.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_079_000M1_scaffold_951_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7178..8542
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20609.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_951_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8630..9274
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20610.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_951_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9225..12572
DNA (3348bp) protein (1116aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G102_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20611.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
SMC domain-containing protein
L3_079_000M1_scaffold_951_9
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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12585..15200
DNA (2616bp) protein (872aa)
RNA polymerase sigma-54 subunit n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y326_9FIRM
RNA polymerase sigma-54 subunit {ECO:0000313|EMBL:CDA15611.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
RNA polymerase sigma-54 subunit
L3_079_000M1_scaffold_951_10
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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15381..16157
DNA (777bp) protein (259aa)
manY2; PTS system mannose/fructose/sorbose transporter subunit IIC (EC:2.7.1.69)
PTS family mannose/fructose/sorbose porter component IIC n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YGF8_9FIRM
PTS family mannose/fructose/sorbose porter component IIC {ECO:0000313|EMBL:CDA15612.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_079_000M1_scaffold_951_11
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

16144..16953
DNA (810bp) protein (270aa)
PTS system mannose-specific transporter subunit IID (EC:2.7.1.69)
Putative mannose permease IID component n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XJH7_9FIRM
Putative mannose permease IID component {ECO:0000313|EMBL:CDA15613.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_079_000M1_scaffold_951_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16978..17457
DNA (480bp) protein (160aa)
manX2; PTS system mannose/fructose/sorbose transporter subunit IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=1 Tax=Clostridium nexile CAG:348 RepID=R6PY35_9CLOT
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:CDC23366.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_079_000M1_scaffold_951_13
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

17472..17891
DNA (420bp) protein (140aa)
PTS system mannose/fructose/sorbose transporter subunit IIA (EC:2.7.1.69)
PTS system IIa component n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XL90_9FIRM
PTS system IIa component {ECO:0000313|EMBL:CDA15615.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_079_000M1_scaffold_951_14
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

17884..19221
DNA (1338bp) protein (446aa)
Sucrose-6-phosphate hydrolase n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XFB6_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:CDA13540.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
sucrose-6-phosphate hydrolase
L3_079_000M1_scaffold_951_15
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

19233..20489
DNA (1257bp) protein (419aa)
RNA polymerase sigma-54 factor n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XXB6_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDA13541.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
RpoN; DNA-directed RNA polymerase specialized sigma subunits, sigma54 homologs
L3_079_000M1_scaffold_951_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20530..21387)
DNA (858bp) protein (286aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1F3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE20613.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
xylan 1,4-beta-xylosidase
L3_079_000M1_scaffold_951_17
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21542..21739
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62644.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_079_000M1_scaffold_951_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22224..22328
DNA (105bp) protein (35aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Dorea RepID=A6BIA8_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE20615.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L3_079_000M1_scaffold_951_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22341..22745
DNA (405bp) protein (135aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G106_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE20616.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CarD family transcriptional regulator
L3_079_000M1_scaffold_951_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23274..24629
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62640.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted ATPase (AAA+ superfamily)
L3_079_000M1_scaffold_951_21
unknown

Not on your lists

25073..25171
DNA (99bp) protein (33aa)

This feature has no annotations

L3_079_000M1_scaffold_951_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25168..25968
DNA (801bp) protein (267aa)
Metallo-beta-lactamase domain protein n=2 Tax=Dorea RepID=A6BIA3_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDM62638.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
L3_079_000M1_scaffold_951_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26090..27049)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FZF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20619.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_951_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27347..27880
DNA (534bp) protein (178aa)
Cupin domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0D5_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDE20620.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
XRE family transcriptional regulator
L3_079_000M1_scaffold_951_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27972..29549
DNA (1578bp) protein (526aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Polyamine ABC transporter, ATP-binding protein n=2 Tax=Dorea RepID=A6BI99_9FIRM
potA; spermidine/putrescine ABC transporter ATP-binding protein
L3_079_000M1_scaffold_951_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29551..30387
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI98_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62633.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_079_000M1_scaffold_951_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30393..31169
DNA (777bp) protein (259aa)
ABC transporter permease protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1G1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62632.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type spermidine/putrescine transport system, permease component II
Displaying 27 items

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