ggKbase home page

L3_079_000M1_scaffold_1354_9

Organism: dasL3_079_000M1_metabat_metabat_47_fa_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 11221..11967

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 490
  • Evalue 1.40e-135
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12 5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 242.0
  • Bit_score: 266
  • Evalue 6.70e-69
Pseudouridine synthase n=2 Tax=Dorea RepID=A6BKF5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 248.0
  • Bit_score: 490
  • Evalue 1.00e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dorea longicatena → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 747
ATGATTAGGCTGAATAAATATTTAAGCGAAGCCGGTGTGTGCTCAAGAAGAGAGGCGGACCGGCTGATAGAATCTGGCGTTGTAACGGTGGATGGAAAAAATGCCGTACCCGGAATGAAGGTTGAAGACGGACAGGAAGTCTGTGTGGGGAAAAAACGGATAAAAAGCAAGACAAAAAAGACAGTCCTGGCGGTATATAAACCCGCTGGGATTGTTTGCACAGAAGATAAAAGGGAAAAGAAGAATATTATCAGATTCCTGAATTATCCGCTACGCGTGACCTATGCGGGAAGACTGGATAAAGATTCGGAAGGACTTCTGATCATGACCAATGATGGTGATCTGATCAATGGCATGATGCGTGCAAGATTCTCCCATGAGAAAGAATATAAGGTCACAGTTAATAAAGAAATCACACCGGAGTTCATAGAAAAAATGAGTCGCGGAGTACATATCAGAGACAGGGAGAAGAACCTGGATGCGGTGACCAGGCCGTGTAAAGTGAGAAAGAATGGAAAATACACATTTTCCATTATTCTGACGCAGGGCCTTAACAGACAGATCCGCAGGATGTGTGAGGCACTTGGCTATAAGGTGACAACACTGAAGAGAATCCGCATTATGAATGTAGAACTAGGTAATCTGAAACCGGGAGAGGTAAGAGAATTAACAGAACAGGAGTTAAAAGAATTGTATGGGACAGTCAAAGAACGAGAGAATGAAAGAACTGGTCAGCCTTCTGAATAA
PROTEIN sequence
Length: 249
MIRLNKYLSEAGVCSRREADRLIESGVVTVDGKNAVPGMKVEDGQEVCVGKKRIKSKTKKTVLAVYKPAGIVCTEDKREKKNIIRFLNYPLRVTYAGRLDKDSEGLLIMTNDGDLINGMMRARFSHEKEYKVTVNKEITPEFIEKMSRGVHIRDREKNLDAVTRPCKVRKNGKYTFSIILTQGLNRQIRRMCEALGYKVTTLKRIRIMNVELGNLKPGEVRELTEQELKELYGTVKERENERTGQPSE*