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L3_079_000M1_scaffold_1354

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1354_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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208..912
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYW9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE18887.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_079_000M1_scaffold_1354_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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935..4273
DNA (3339bp) protein (1113aa)
Efflux ABC transporter permease protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUB8_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDE18889.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted permease.
L3_079_000M1_scaffold_1354_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4538..6598
DNA (2061bp) protein (687aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKG2_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDE18890.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Molecular chaperone, HSP90 family
L3_079_000M1_scaffold_1354_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6679..7158)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BKG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18892.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1354_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7302..8126
DNA (825bp) protein (275aa)
GDSL-like protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FW59_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CDE18896.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Lysophospholipase L1 and related esterases
L3_079_000M1_scaffold_1354_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8126..8614
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BKF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18899.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1354_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8635..10041
DNA (1407bp) protein (469aa)
MBOAT family protein n=2 Tax=Dorea RepID=A6BKF7_9FIRM
MBOAT family protein {ECO:0000313|EMBL:CDE18902.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein involved in D-alanine export
L3_079_000M1_scaffold_1354_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10050..11228
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61844.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_079_000M1_scaffold_1354_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11221..11967
DNA (747bp) protein (249aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=2 Tax=Dorea RepID=A6BKF5_9FIRM
L3_079_000M1_scaffold_1354_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11915..13882
DNA (1968bp) protein (656aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUD5_9FIRM
L3_079_000M1_scaffold_1354_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13938..15389
DNA (1452bp) protein (484aa)
ATP-dependent Clp protease, ATP-binding subunit ClpX n=2 Tax=Dorea RepID=A6BKF3_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000313|EMBL:CDE18910.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_079_000M1_scaffold_1354_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15454..16812
DNA (1359bp) protein (453aa)
Citrate transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKF2_9FIRM
Citrate transporter {ECO:0000313|EMBL:EDM61840.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transporter, UIT6 family (TC 9.B.53)
L3_079_000M1_scaffold_1354_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16828..17832
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FW76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18916.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1354_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17843..19603
DNA (1761bp) protein (587aa)
Peptidase S8/S53 family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYZ5_9FIRM
Peptidase S8/S53 family {ECO:0000313|EMBL:CDE18917.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Subtilase family.
L3_079_000M1_scaffold_1354_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19632..19922
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BKE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18920.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1354_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19923..20381
DNA (459bp) protein (153aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYZ9_9FIRM
peptidase A8 signal peptidase II
L3_079_000M1_scaffold_1354_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20931..21827
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0P7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21044.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_079_000M1_scaffold_1354_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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21767..22858
DNA (1092bp) protein (364aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDM61834.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDM61834.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
PLP-dependent aminotransferase (EC:4.4.1.8)
Aminotransferase, class I/II n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKE6_9FIRM
Displaying 18 items

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