ggKbase home page

L3_079_000M1_scaffold_5128

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_5128_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

267..1535
DNA (1269bp) protein (423aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AC18_9CLOT
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CDD55885.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_5128_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1818..2846)
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium sp. CAG:43 RepID=R7A4Z6_9CLOT
L3_079_000M1_scaffold_5128_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3311..3883
DNA (573bp) protein (191aa)
TRAP transporter DctQ-like membrane protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AK31_9CLOT
TRAP transporter DctQ-like membrane protein {ECO:0000313|EMBL:CDD55874.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_079_000M1_scaffold_5128_4
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3884..6553
DNA (2670bp) protein (890aa)
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=2 Tax=Ruminococcus RepID=D4LIH3_9FIRM
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:CBL19634.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Displaying 4 items

View Taxonomy