ggKbase home page

L3_079_000M1_scaffold_5258

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_5258_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..616
DNA (615bp) protein (205aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:43 RepID=R7B692_9CLOT
transcription termination factor Rho
L3_079_000M1_scaffold_5258_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


933..1142
DNA (210bp) protein (70aa)
50S ribosomal protein L31 n=1 Tax=Clostridium sp. CAG:43 RepID=R7AEK4_9CLOT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
LSU ribosomal protein L31P
L3_079_000M1_scaffold_5258_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1229..2185
DNA (957bp) protein (319aa)
Predicted metal-dependent enzyme n=1 Tax=Clostridium sp. CAG:43 RepID=R7B566_9CLOT
Predicted metal-dependent enzyme {ECO:0000313|EMBL:CDD59247.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted metal-dependent enzyme
L3_079_000M1_scaffold_5258_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2218..3216
DNA (999bp) protein (333aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Release factor glutamine methyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4B5_9CLOT
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_079_000M1_scaffold_5258_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3235..4311
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. CAG:43 RepID=R7ALJ0_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_079_000M1_scaffold_5258_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4343..4831
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B438_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59244.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
zinc-binding CMP/dCMP deaminase
L3_079_000M1_scaffold_5258_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4800..5579
DNA (780bp) protein (260aa)
SrtB family sortase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AEK0_9CLOT
SrtB family sortase {ECO:0000313|EMBL:CDD59243.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
sortase
L3_079_000M1_scaffold_5258_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5868..6431
DNA (564bp) protein (188aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B685_9CLOT
Displaying 8 items

View Taxonomy