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L3_079_000M1_scaffold_2005

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_2005_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..764
DNA (762bp) protein (254aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BQX1_CLOSY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI74193.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_079_000M1_scaffold_2005_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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920..2890
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A4A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55638.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
CARDB.
L3_079_000M1_scaffold_2005_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2906..4267
DNA (1362bp) protein (454aa)
ABC superfamily ATP binding cassette transporter n=1 Tax=Clostridium sp. CAG:43 RepID=R7AQC7_9CLOT
ABC superfamily ATP binding cassette transporter {ECO:0000313|EMBL:CDD55636.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ABC-type antimicrobial peptide transport system, permease component
L3_079_000M1_scaffold_2005_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4397..4906
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AIL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55374.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_2005_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5048..8125
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7APN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55376.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
putative metallopeptidase
L3_079_000M1_scaffold_2005_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8157..9842
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A3J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55378.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
type II secretion system protein E
L3_079_000M1_scaffold_2005_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9875..10936
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AAK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55380.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
pilus retraction protein PilT
L3_079_000M1_scaffold_2005_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11085..12191
DNA (1107bp) protein (369aa)
Stage V sporulation protein AD n=2 Tax=Clostridium RepID=G5F9R6_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:EHF06856.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Stage V sporulation protein AD (SpoVAD).
L3_079_000M1_scaffold_2005_9
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12230..12586
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Clostridium sp. CAG:43 RepID=R7AIM4_9CLOT
Stage V sporulation protein AE {ECO:0000313|EMBL:CDD55389.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
SpoVA protein
L3_079_000M1_scaffold_2005_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12723..15434)
DNA (2712bp) protein (904aa)
Membrane carboxypeptidase/penicillin-binding protein (EC:2.4.1.- 3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7APP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55391.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_2005_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15722..16108
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A3K8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55393.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
conserved hypothetical protein TIGR00257
Displaying 11 items

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