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L3_079_000M1_scaffold_2427

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_2427_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1022
DNA (1020bp) protein (340aa)
Sporulation factor SpoIIGA n=1 Tax=Clostridium sp. CAG:43 RepID=R7B225_9CLOT
Sporulation factor SpoIIGA {ECO:0000313|EMBL:CDD57767.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
peptidase U4 sporulation factor SpoIIGA
L3_079_000M1_scaffold_2427_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1078..1836
DNA (759bp) protein (253aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:43 RepID=R7AAD1_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
RNA polymerase, sigma 29 subunit, SigE
L3_079_000M1_scaffold_2427_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1790..2857)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AHC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57770.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
acyltransferase 3
L3_079_000M1_scaffold_2427_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3100..3876
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=3 Tax=Clostridium symbiosum RepID=U2DFC6_CLOSY
RNA polymerase, sigma subunit, RpsG/SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_079_000M1_scaffold_2427_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4328..5116
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B233_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57784.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_2427_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5236..6009)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Type III pantothenate kinase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1X8_9CLOT
transcriptional activator, Baf family
L3_079_000M1_scaffold_2427_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6319..7908
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=3 Tax=Clostridium RepID=E7GSA0_CLOSY
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
peptide chain release factor 3
L3_079_000M1_scaffold_2427_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8234..8683
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57829.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_2427_9
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8716..10119
DNA (1404bp) protein (468aa)
dipeptidase, putative (EC:3.5.1.18)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B2T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57831.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_2427_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10274..11266
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GSA3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06812.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
FAD binding domain.
L3_079_000M1_scaffold_2427_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11635..12933
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AAK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57843.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
gltT; Proton/sodium-glutamate symport protein
L3_079_000M1_scaffold_2427_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13184..13450
DNA (267bp) protein (89aa)
Leucyl aminopeptidase (Fragment) n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GLK5_CLOSY
Leucyl aminopeptidase {ECO:0000313|EMBL:EGA94332.1}; Flags: Fragment;; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Leucyl aminopeptidase (aminopeptidase T)
Displaying 12 items

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