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L3_079_000M1_scaffold_1067

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1067_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(41..829)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AQF2_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
putative ABC-transporter
L3_079_000M1_scaffold_1067_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(832..1947)
DNA (1116bp) protein (372aa)
Glycosyl transferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AJF5_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:CDD55659.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Glycosyltransferases involved in cell wall biogenesis
L3_079_000M1_scaffold_1067_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1910..3130)
DNA (1221bp) protein (407aa)
Bacterial sugar transferase family protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1N2_9CLOT
Bacterial sugar transferase family protein {ECO:0000313|EMBL:CDD55657.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L3_079_000M1_scaffold_1067_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3389..4300)
DNA (912bp) protein (304aa)
Amylovoran biosynthesis glycosyltransferase AmsE n=1 Tax=Clostridium sp. CAG:43 RepID=R7B0I3_9CLOT
Amylovoran biosynthesis glycosyltransferase AmsE {ECO:0000313|EMBL:CDD55652.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_079_000M1_scaffold_1067_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4297..4833)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ABC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55645.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
NusG antitermination factor
L3_079_000M1_scaffold_1067_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5357..5887)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79701.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_079_000M1_scaffold_1067_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5923..6387)
DNA (465bp) protein (155aa)
SsrA-binding protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AH68_9CLOT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
SsrA-binding protein
L3_079_000M1_scaffold_1067_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6437..9091)
DNA (2655bp) protein (885aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Ribonuclease R n=1 Tax=Clostridium sp. CAG:43 RepID=R7B610_9CLOT
ribonuclease R
L3_079_000M1_scaffold_1067_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9264..9500)
DNA (237bp) protein (79aa)
Protein translocase, SecG subunit n=4 Tax=Clostridiales RepID=D4MQD5_9FIRM
protein translocase, SecG subunit
Protein translocase SecG subunit {ECO:0000313|EMBL:CCY82124.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000M1_scaffold_1067_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9751..11466
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5W1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60137.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1067_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11474..12484
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AP45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60135.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1067_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12552..13280)
DNA (729bp) protein (243aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60134.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_1067_13
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13366..14178)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AH52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60133.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1067_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14175..15374)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B7R8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60132.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1067_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15423..19022)
DNA (3600bp) protein (1200aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B6P4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60131.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1067_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19200..24119)
DNA (4920bp) protein (1640aa)
PKD domain containing protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B066_9CLOT
PKD domain containing protein {ECO:0000313|EMBL:CDD55052.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
prepilin-type N-terminal cleavage/methylation domain
L3_079_000M1_scaffold_1067_17
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24201..24872)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A9Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55050.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_1067_18
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24884..25309)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AHS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55049.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_1067_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25299..26162)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A2P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55048.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_1067_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26166..26861)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IU56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40337.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
General secretion pathway, M protein.
L3_079_000M1_scaffold_1067_21
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26858..27484)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54669.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1067_22
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27497..27874)
DNA (378bp) protein (126aa)
Predicted ATPase of the HSP70 class involved in cell division n=1 Tax=Clostridium sp. CAG:43 RepID=R7A1L3_9CLOT
Predicted ATPase of the HSP70 class involved in cell division {ECO:0000313|EMBL:CDD54668.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Displaying 22 items

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