ggKbase home page

L3_079_000M1_scaffold_1733

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1733_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1470)
DNA (1470bp) protein (490aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4M6_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDD59519.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_079_000M1_scaffold_1733_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1503..2885)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B508_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59517.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
mate efflux family protein
L3_079_000M1_scaffold_1733_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3017..3649)
DNA (633bp) protein (211aa)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5P9_9CLOT
Cytidylate kinase {ECO:0000313|EMBL:CDD59514.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cytidylate kinase
L3_079_000M1_scaffold_1733_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..4620)
DNA (801bp) protein (267aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F795_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07799.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_079_000M1_scaffold_1733_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4693..5493)
DNA (801bp) protein (267aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B6S9_9CLOT
L3_079_000M1_scaffold_1733_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5540..6094)
DNA (555bp) protein (185aa)
Response regulator receiver and ANTAR domain-containing protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4U0_9CLOT
Response regulator receiver and ANTAR domain-containing protein {ECO:0000313|EMBL:CDD59504.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ANTAR domain-containing protein
L3_079_000M1_scaffold_1733_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6126..7445)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AFE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59503.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
glutamine synthetase, type I
L3_079_000M1_scaffold_1733_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7666..8526)
DNA (861bp) protein (287aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4Z9_9CLOT
diaminopimelate epimerase
L3_079_000M1_scaffold_1733_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9070..10011
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F790_9CLOT
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:EGA94909.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
AraC-type DNA-binding domain-containing proteins
L3_079_000M1_scaffold_1733_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10027..11142)
DNA (1116bp) protein (372aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. CAG:43 RepID=R7AH95_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CDD54899.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
sporulation integral membrane protein YtvI
L3_079_000M1_scaffold_1733_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11181..12371)
DNA (1191bp) protein (397aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A266_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54898.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_1733_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12511..13812)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZ89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54897.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1733_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13866..14129)
DNA (264bp) protein (88aa)
Phosphocarrier, HPr family n=4 Tax=Clostridium RepID=E9SPP6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07789.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Phosphotransferase System HPr (HPr) Family
L3_079_000M1_scaffold_1733_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14174..15550)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ANA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54896.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
YbbR-like protein.
L3_079_000M1_scaffold_1733_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15528..16403)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A987_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54895.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
conserved hypothetical protein TIGR00159
L3_079_000M1_scaffold_1733_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16502..17437)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AH90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54894.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1733_17
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17434..17862)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A260_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54893.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
Displaying 17 items

View Taxonomy