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L3_079_000M1_scaffold_1825

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1825_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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286..762
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZ33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54892.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1825_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(818..1312)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AF83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59483.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1825_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2254..3237)
DNA (984bp) protein (328aa)
DNA polymerase III delta subunit n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4L6_9CLOT
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDD59486.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
DNA polymerase III subunit delta
L3_079_000M1_scaffold_1825_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3450..5810)
DNA (2361bp) protein (787aa)
Ferrous iron transport protein B n=1 Tax=Clostridium sp. CAG:43 RepID=R7B4T4_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:CDD59487.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ferrous iron transporter FeoB
L3_079_000M1_scaffold_1825_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6425..7879)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AM83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59490.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1825_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7876..8466)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B6S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59491.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_000M1_scaffold_1825_7
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8587..9342)
DNA (756bp) protein (252aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. M62/1 RepID=D4C8Q6_9CLOT
tRNA pseudouridine synthase A
L3_079_000M1_scaffold_1825_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9358..9936)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F740_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07744.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted integral membrane protein
L3_079_000M1_scaffold_1825_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9982..11157)
DNA (1176bp) protein (392aa)
dapL2; LL-diaminopimelate aminotransferase DapL (EC:2.6.1.83)
Putative LL-diaminopimelate aminotransferase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D7S2_CLOSY
Putative LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:ERI77527.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_079_000M1_scaffold_1825_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11482..12309
DNA (828bp) protein (276aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5T3_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDD60087.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
4Fe-4S binding domain.
L3_079_000M1_scaffold_1825_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12453..12797
DNA (345bp) protein (115aa)
Cupin domain protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B6L5_9CLOT
Cupin domain protein {ECO:0000313|EMBL:CDD60089.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cupin domain.
L3_079_000M1_scaffold_1825_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13008..13919)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B7N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60091.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
LysR family transcriptional regulator
L3_079_000M1_scaffold_1825_13
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14132..15274
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5X3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60092.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1825_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15392..16240
DNA (849bp) protein (283aa)
D-alanine aminotransferase (EC:2.6.1.21)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AH20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60093.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_1825_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16721..17011
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B0Y1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57381.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1825_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16995..17273
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B168_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57382.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1825_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17248..17463)
DNA (216bp) protein (72aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5B3_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CCY44231.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
efflux protein
Displaying 17 items

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