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L3_079_000M1_scaffold_1828

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1828_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..779
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5V3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59631.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ABC-type multidrug transport system, ATPase component
L3_079_000M1_scaffold_1828_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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845..2686
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B509_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD59629.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_1828_3
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2697..3890
DNA (1194bp) protein (398aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CG38_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE11268.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_079_000M1_scaffold_1828_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3894..5003
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=U2D4F5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI74426.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_079_000M1_scaffold_1828_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5379..6734
DNA (1356bp) protein (452aa)
Magnesium transporter n=1 Tax=Clostridium sp. CAG:43 RepID=R7B5L9_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Mg2+ transporter (mgtE)
L3_079_000M1_scaffold_1828_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6861..8354
DNA (1494bp) protein (498aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AM36_9CLOT
L3_079_000M1_scaffold_1828_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8636..10468
DNA (1833bp) protein (611aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GIP3_CLOSY
L3_079_000M1_scaffold_1828_8
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10543..10761
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPT7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY09676.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L3_079_000M1_scaffold_1828_9
unknown

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10801..10935
DNA (135bp) protein (45aa)

This feature has no annotations

L3_079_000M1_scaffold_1828_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11235..15344
DNA (4110bp) protein (1370aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
CRISPR-associated protein, Csn1 family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PI18_9FIRM
CRISPR-associated endonuclease, Csn1 family
L3_079_000M1_scaffold_1828_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15341..16213
DNA (873bp) protein (291aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZ44_9FIRM
CRISPR-associated protein, Cas1 family
L3_079_000M1_scaffold_1828_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16218..16523
DNA (306bp) protein (102aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PGT6_9FIRM
CRISPR-associated protein Cas2
L3_079_000M1_scaffold_1828_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16520..17188
DNA (669bp) protein (223aa)
CRISPR-associated protein, Csn2 family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXC0_9FIRM
CRISPR-associated protein, Csn2 family {ECO:0000313|EMBL:ERK43392.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
CRISPR-associated Csn2
Displaying 13 items

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