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L3_079_000M1_scaffold_874

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_874_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..988
DNA (987bp) protein (329aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1R5_9CLOT
Holliday junction DNA helicase, RuvB subunit
L3_079_000M1_scaffold_874_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1077..2297
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57620.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cell division protein ZapA.
L3_079_000M1_scaffold_874_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2311..4680
DNA (2370bp) protein (790aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLW8_CLOSY
U32 family Peptidase {ECO:0000313|EMBL:EGA92404.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_079_000M1_scaffold_874_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4728..6068
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1I0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57596.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Bacterial cell division membrane protein
L3_079_000M1_scaffold_874_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6052..7512
DNA (1461bp) protein (487aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLW6_CLOSY
Cell division protein FtsI/penicillin-binding protein 2
L3_079_000M1_scaffold_874_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7587..8873)
DNA (1287bp) protein (429aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GIK9_CLOSY
L3_079_000M1_scaffold_874_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8931..10037)
DNA (1107bp) protein (369aa)
Prephenate dehydrogenase (EC:1.3.1.12)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1H5_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000313|EMBL:CDD57587.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_874_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10374..12464
DNA (2091bp) protein (697aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B185_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57586.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_874_9
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12999..14129
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57574.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_874_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14126..14647
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B2A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57572.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L3_079_000M1_scaffold_874_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14806..16125)
DNA (1320bp) protein (440aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGV2_9CLOT
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:CDD57570.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Acetyl-CoA hydrolase
L3_079_000M1_scaffold_874_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16528..17883
DNA (1356bp) protein (452aa)
Na+ driven multidrug efflux pump n=1 Tax=Clostridium sp. CAG:43 RepID=R7A9V4_9CLOT
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CDD57568.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
MatE family transporter
L3_079_000M1_scaffold_874_13
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17914..18972
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3E7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57566.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_874_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19206..19418
DNA (213bp) protein (71aa)
FeoA domain protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B2A1_9CLOT
FeoA domain protein {ECO:0000313|EMBL:CDD57564.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
FeoA domain.
L3_079_000M1_scaffold_874_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19981..22392
DNA (2412bp) protein (804aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1F8_9CLOT
L3_079_000M1_scaffold_874_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22963..23529
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ABC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55645.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L3_079_000M1_scaffold_874_17
Enterococcus haemoperoxidus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23492..24367
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Enterococcus haemoperoxidus ATCC BAA-382 RepID=R2SXF5_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH92744.1}; TaxID=1158608 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus haemoperoxidus ATCC BAA-382.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_079_000M1_scaffold_874_18
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24602..25822
DNA (1221bp) protein (407aa)
Bacterial sugar transferase family protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1N2_9CLOT
Bacterial sugar transferase family protein {ECO:0000313|EMBL:CDD55657.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L3_079_000M1_scaffold_874_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25785..26861
DNA (1077bp) protein (359aa)
Glycosyl transferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AJF5_9CLOT
Glycosyl transferase {ECO:0000313|EMBL:CDD55659.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Glycosyltransferases involved in cell wall biogenesis
L3_079_000M1_scaffold_874_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26922..28724
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE2015 RepID=UPI0003B431FC
Uncharacterized protein {ECO:0000313|EMBL:ENZ61673.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
glycosyl transferase 2
L3_079_000M1_scaffold_874_21
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28756..29544
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AQF2_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
putative ABC-transporter
L3_079_000M1_scaffold_874_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29561..30313
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G3Y6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY10579.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_079_000M1_scaffold_874_23
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30306..31259
DNA (954bp) protein (318aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95809.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_079_000M1_scaffold_874_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31250..32656
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95808.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits
Displaying 24 items

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