ggKbase home page

L3_079_029G1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_15_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

209..1186
DNA (978bp) protein (326aa)
Kinase, PfkB family n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Y1_9PORP
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS71454.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
PfkB family carbohydrate kinase
L3_079_029G1_scaffold_15_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1235..2941
DNA (1707bp) protein (569aa)
Carboxy-terminal processing protease n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFF0_9PORP
Carboxy-terminal processing protease {ECO:0000313|EMBL:CDB48907.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
carboxy-terminal processing protease
L3_079_029G1_scaffold_15_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3012..4190)
DNA (1179bp) protein (393aa)
Ser/Thr phosphatase family protein n=2 Tax=Parabacteroides RepID=C7X5Y3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28217.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
phosphoesterase
L3_079_029G1_scaffold_15_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4193..5287)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6ABX5_9PORP
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:KDS53608.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_079_029G1_scaffold_15_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5575..6267)
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Y5_9PORP
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU53305.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
two-component system response regulator
L3_079_029G1_scaffold_15_6
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6274..7650)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDB7_9BACE
two-component system sensor histidine kinase
L3_079_029G1_scaffold_15_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7810..7947
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS53603.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_079_029G1_scaffold_15_8
unknown

Not on your lists

8064..8246
DNA (183bp) protein (61aa)

This feature has no annotations

L3_079_029G1_scaffold_15_9
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8327..9661
DNA (1335bp) protein (445aa)
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein n=1 Tax=Prevotella nigrescens F0103 RepID=L9PX11_9BACT
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein {ECO:0000313|EMBL:ELX68184.1}; TaxID=702439 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens F0103.;"
putative transcriptional regulator
L3_079_029G1_scaffold_15_10
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9693..12002
DNA (2310bp) protein (770aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5U0M3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ69159.1}; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
hypothetical protein
L3_079_029G1_scaffold_15_11
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12048..12992
DNA (945bp) protein (315aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PWN0_9BACE
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EGF51959.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
L3_079_029G1_scaffold_15_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13124..13738
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFC0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83995.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
glycosyl transferase family protein
L3_079_029G1_scaffold_15_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13716..14306
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LGQ4_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ84748.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_079_029G1_scaffold_15_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14317..14985
DNA (669bp) protein (223aa)
Glycosyltransferase family 32 n=5 Tax=Parabacteroides RepID=A6LGQ1_PARD8
glycosyl transferase family protein
Glycosyltransferase family 32 {ECO:0000313|EMBL:ABR44865.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_079_029G1_scaffold_15_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15021..17228
DNA (2208bp) protein (736aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMR3_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFI10640.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
ABC transporter ATP-binding protein
L3_079_029G1_scaffold_15_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17233..17421
DNA (189bp) protein (63aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K5Z2S3_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10641.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_079_029G1_scaffold_15_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17474..17908
DNA (435bp) protein (145aa)
Toxin-antitoxin system antitoxin component n=2 Tax=Bacteroidales RepID=D7IMR5_9BACE
HI0074 family nucleotidyltransferase substrate binding protein {ECO:0000313|EMBL:EKN28207.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_079_029G1_scaffold_15_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17917..18240
DNA (324bp) protein (108aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6ABW5_9PORP
nucleotidyltransferase
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:KDS64555.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_079_029G1_scaffold_15_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18294..18935)
DNA (642bp) protein (214aa)
SagB-type dehydrogenase domain protein n=2 Tax=Parabacteroides RepID=E1YPW8_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:KDS53591.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_079_029G1_scaffold_15_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19110..21569
DNA (2460bp) protein (820aa)
TonB-dependent receptor n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Z4_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEU53314.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
TonB-dependent receptor
L3_079_029G1_scaffold_15_21
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21774..24248
DNA (2475bp) protein (825aa)
TonB-dependent receptor n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Z5_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEU53315.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
TonB-dependent receptor
L3_079_029G1_scaffold_15_22
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24414..26168
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IU27_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB48901.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_079_029G1_scaffold_15_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26172..27680
DNA (1509bp) protein (503aa)
WD40-like protein n=4 Tax=Bacteroidales RepID=D0TDA6_9BACE
WD40-like Beta Propeller Repeat family protein {ECO:0000313|EMBL:KDS53606.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_079_029G1_scaffold_15_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27719..29719
DNA (2001bp) protein (667aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Fructose-1,6-bisphosphatase class 3 n=5 Tax=Bacteroidales RepID=F16PC_PARD8
fructose-1,6-bisphosphatase
L3_079_029G1_scaffold_15_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30130..33108
DNA (2979bp) protein (993aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroidales RepID=C7X602_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU53322.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_079_029G1_scaffold_15_26
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33130..34695
DNA (1566bp) protein (522aa)
RagB/SusD domain-containing protein n=3 Tax=Bacteroidales RepID=D7IMS2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ85290.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_079_029G1_scaffold_15_27
unknown

Not on your lists

34751..35167
DNA (417bp) protein (139aa)

This feature has no annotations

L3_079_029G1_scaffold_15_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35840..37573
DNA (1734bp) protein (578aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7M4C7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:KDS16073.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L3_079_029G1_scaffold_15_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37606..38640
DNA (1035bp) protein (345aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X605_9PORP
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEU53325.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
iron(III) ABC transporter permease
L3_079_029G1_scaffold_15_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38646..39656
DNA (1011bp) protein (337aa)
ABC transporter, ATP-binding protein n=4 Tax=Bacteroidales RepID=D0TD96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN21513.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
iron(III) ABC transporter ATP-binding protein
Displaying items 1-30 of 167 in total

View Taxonomy