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L3_079_029G1_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_28_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1057
DNA (1056bp) protein (352aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LMH0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDS03802.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_079_029G1_scaffold_28_2
unknown

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1079..1207
DNA (129bp) protein (43aa)

This feature has no annotations

L3_079_029G1_scaffold_28_3
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1472..1993
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TAH0_BACOV
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:KHM45099.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
riboflavin biosynthesis protein RibD
L3_079_029G1_scaffold_28_4
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1990..2367)
DNA (378bp) protein (126aa)
HTH-type transcriptional activator HxlR n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QQ60_9BACE
HTH-type transcriptional activator HxlR {ECO:0000313|EMBL:EEO54094.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
Predicted transcriptional regulators
L3_079_029G1_scaffold_28_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2540..3406
DNA (867bp) protein (289aa)
Radical SAM domain protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DY60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ86521.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Fe-S oxidoreductase
L3_079_029G1_scaffold_28_6
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3438..4352
DNA (915bp) protein (305aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
Dihydroorotate dehydrogenase n=3 Tax=Parabacteroides RepID=K6A5N1_9PORP
dihydroorotate dehydrogenase 1B
L3_079_029G1_scaffold_28_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5192..6250
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64WU0_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ79403.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_029G1_scaffold_28_8
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6284..6409
DNA (126bp) protein (42aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=I0PYY6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD45342.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
hypothetical protein
L3_079_029G1_scaffold_28_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6592..7506)
DNA (915bp) protein (305aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64WT9_BACFR
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKA84573.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_029G1_scaffold_28_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7576..8145)
DNA (570bp) protein (190aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64WT8_BACFR
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EXY85359.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
hypothetical protein
L3_079_029G1_scaffold_28_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8428..9468
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9RJN5_BACFG
putative zinc-binding alcohol dehydrogenase
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EXZ29530.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_079_029G1_scaffold_28_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9548..10360
DNA (813bp) protein (271aa)
RNA methyltransferase, TrmH family n=7 Tax=Bacteroides RepID=D1JJZ0_9BACE
putative SpoU-like rRNA methylase
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:EXY91545.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_079_029G1_scaffold_28_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10536..10859
DNA (324bp) protein (108aa)
Thioredoxin n=8 Tax=Bacteroides RepID=E1WRS0_BACF6
putative thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_029G1_scaffold_28_14
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10977..12506)
DNA (1530bp) protein (510aa)
Arylsulfatase {ECO:0000313|EMBL:EEZ26679.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEZ26679.1};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
Arylsulfatase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JJZ2_9BACE
putative sulfatase protein
L3_079_029G1_scaffold_28_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12745..15123
DNA (2379bp) protein (793aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
PAS domain S-box protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I4F1_9BACE
putative two-component sensor histidine kinase
L3_079_029G1_scaffold_28_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15288..16322
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6I4F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ20314.1}; TaxID=1339271 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. J-143-4.;"
hypothetical protein
L3_079_029G1_scaffold_28_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16441..18387
DNA (1947bp) protein (649aa)
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EXZ79413.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EXZ79413.1};; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
Heavy metal translocating P-type ATPase n=2 Tax=Bacteroides fragilis RepID=I8WXH8_BACFG
putative transmembrane cation transport P type ATPase
L3_079_029G1_scaffold_28_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18390..18821
DNA (432bp) protein (144aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=E1WRS5_BACF6
Ferric uptake regulator family protein {ECO:0000313|EMBL:EXZ74109.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_079_029G1_scaffold_28_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18881..20017)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=I3HUC5_BACFG
putative outer membrane protein
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:EXZ45448.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_079_029G1_scaffold_28_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20501..20893
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HUC4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY50505.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_079_029G1_scaffold_28_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20977..22383
DNA (1407bp) protein (469aa)
purF; putative amidophosphoribosyltransferase precursor (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
Amidophosphoribosyltransferase n=3 Tax=Bacteroides fragilis RepID=Q5LFT8_BACFN
L3_079_029G1_scaffold_28_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22516..23739
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
Peptidase T n=13 Tax=Bacteroides RepID=PEPT_BACFN
pepT; putative peptidase t
L3_079_029G1_scaffold_28_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23773..24858
DNA (1086bp) protein (362aa)
gcvT; putative aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Aminomethyltransferase n=6 Tax=Bacteroides RepID=GCST_BACFN
L3_079_029G1_scaffold_28_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25608..25820)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8XHZ0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ74006.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_079_029G1_scaffold_28_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25915..27537
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HUB8_BACFG
Putative membrane protein {ECO:0000313|EMBL:EYE55140.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L3_079_029G1_scaffold_28_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27519..28262
DNA (744bp) protein (248aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6I4D9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY50512.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
putative lipoprotein
L3_079_029G1_scaffold_28_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28338..30602
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1G4J0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA84592.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative Na+/H+ family transporter
L3_079_029G1_scaffold_28_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30644..31297
DNA (654bp) protein (218aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q64WR8_BACFR
putative transmembrane protein
LysE type translocator family protein {ECO:0000313|EMBL:EXZ54702.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_029G1_scaffold_28_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31316..31861
DNA (546bp) protein (182aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=E1WRT6_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ79356.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_029G1_scaffold_28_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31997..32860
DNA (864bp) protein (288aa)
rmlD; putative dTDP-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EYB09246.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EYB09246.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
dTDP-4-dehydrorhamnose reductase n=10 Tax=Bacteroides RepID=D1JK09_9BACE
Displaying items 1-30 of 201 in total

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