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L3_079_029G1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_56_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

539..1624
DNA (1086bp) protein (362aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XMW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16666.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Penicillin V acylase-like amidase
L3_079_029G1_scaffold_56_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1629..2882)
DNA (1254bp) protein (418aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZFN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47426.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_079_029G1_scaffold_56_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2927..4120)
DNA (1194bp) protein (398aa)
putative thiolase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase n=2 Tax=Clostridium bolteae RepID=R0B0X9_9CLOT
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:ENZ47427.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_079_029G1_scaffold_56_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4131..4682)
DNA (552bp) protein (184aa)
Biotin biosynthesis protein BioY n=3 Tax=Clostridium RepID=N9Z894_9CLOT
Biotin biosynthesis protein BioY {ECO:0000313|EMBL:ENZ47428.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
bioY family protein
L3_079_029G1_scaffold_56_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4685..5422)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XNB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16670.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_079_029G1_scaffold_56_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5764..6777
DNA (1014bp) protein (338aa)
Exonuclease n=2 Tax=Clostridium bolteae RepID=N9ZFM9_9CLOT
Exonuclease {ECO:0000313|EMBL:ENZ47430.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Exonuclease RNase T and DNA polymerase III
L3_079_029G1_scaffold_56_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6852..7898)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F101_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97244.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
transcriptional regulator
L3_079_029G1_scaffold_56_8
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8216..9451
DNA (1236bp) protein (412aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YXD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97243.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_029G1_scaffold_56_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9578..11113
DNA (1536bp) protein (512aa)
Sugar ABC transporter ATP-binding protein n=4 Tax=Clostridium RepID=N9Z8A1_9CLOT
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ16674.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC transporter
L3_079_029G1_scaffold_56_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11137..12114
DNA (978bp) protein (326aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RJ41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16675.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
branched-chain amino acid transporter permease
L3_079_029G1_scaffold_56_11
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12132..13355
DNA (1224bp) protein (408aa)
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
5'-methylthioribose kinase (EC:2.7.1.100)
Methylthioribose kinase n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EWX0_9CLOT
L3_079_029G1_scaffold_56_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13413..14513
DNA (1101bp) protein (367aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=2 Tax=Clostridium RepID=N9Z9G5_9CLOT
L3_079_029G1_scaffold_56_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14518..14961
DNA (444bp) protein (148aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8RJ38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18937.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_079_029G1_scaffold_56_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14984..15637
DNA (654bp) protein (218aa)
L-ribulose-5-phosphate 4-epimerase n=3 Tax=Clostridium RepID=R0AQG0_9CLOT
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ENZ47439.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L-fuculose phosphate aldolase
L3_079_029G1_scaffold_56_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15656..16651
DNA (996bp) protein (332aa)
dihydroxyacetone kinase DhaK subunit (EC:2.7.1.121 2.7.1.29)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FAM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97236.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_079_029G1_scaffold_56_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16690..17325
DNA (636bp) protein (212aa)
Dihydroxyacetone kinase n=3 Tax=Clostridium RepID=N9ZFL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97235.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Dak phosphatase
L3_079_029G1_scaffold_56_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17443..19155)
DNA (1713bp) protein (571aa)
X-X-X-Leu-X-X-Gly heptad repeat protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z9H0_9CLOT
X-X-X-Leu-X-X-Gly heptad repeat protein {ECO:0000313|EMBL:ENZ16682.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
methyl-accepting chemotaxis protein
L3_079_029G1_scaffold_56_18
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19624..20316)
DNA (693bp) protein (231aa)
Two-component system KDP operon response regulator KdpE n=4 Tax=Clostridium RepID=N9YXF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97233.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
winged helix family two component transcriptional regulator
L3_079_029G1_scaffold_56_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20320..21429)
DNA (1110bp) protein (370aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Two-component system sensor histidine kinase KdpD n=2 Tax=Clostridium RepID=N9Z8C4_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_079_029G1_scaffold_56_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21515..23143)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XND6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16685.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_079_029G1_scaffold_56_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23245..23940)
DNA (696bp) protein (232aa)
Integral membrane protein n=2 Tax=Clostridium bolteae RepID=N9ZFK8_9CLOT
Integral membrane protein {ECO:0000313|EMBL:ENZ47446.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
integral membrane protein
L3_079_029G1_scaffold_56_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24322..24867)
DNA (546bp) protein (182aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9Z9I4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98473.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
4-vinyl reductase 4VR
L3_079_029G1_scaffold_56_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24870..25790)
DNA (921bp) protein (307aa)
Sugar ABC transporter permease n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YXG4_9CLOT
Sugar ABC transporter permease {ECO:0000313|EMBL:ENZ16688.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
inner-membrane translocator
L3_079_029G1_scaffold_56_24
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25787..26836)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9Z8D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97228.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
yufP; putative ABC transporter permease protein YufP
L3_079_029G1_scaffold_56_25
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26829..28355)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F8Y0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97227.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
heme ABC transporter ATP-binding protein
L3_079_029G1_scaffold_56_26
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28418..29542)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9XN11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97226.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
basic membrane lipoprotein
L3_079_029G1_scaffold_56_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29570..30439)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9Z9J0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97225.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
purine or other phosphorylase family 1
L3_079_029G1_scaffold_56_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30608..32260
DNA (1653bp) protein (551aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YXG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47453.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Fis family transcriptional regulator
L3_079_029G1_scaffold_56_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32625..32786)
DNA (162bp) protein (54aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RJ23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12190.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_079_029G1_scaffold_56_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32823..33485)
DNA (663bp) protein (221aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Clostridium bolteae RepID=R0A5K4_9CLOT
Displaying items 1-30 of 122 in total

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