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L3_079_029G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_62_1
unknown

Not on your lists

2..415
DNA (414bp) protein (138aa)

This feature has no annotations

L3_079_029G1_scaffold_62_2
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

417..773
DNA (357bp) protein (119aa)
IS66 Orf2 like protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NNQ2_9FIRM
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:AHF10896.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_079_029G1_scaffold_62_3
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

930..2486
DNA (1557bp) protein (519aa)
Transposase IS66 n=1 Tax=Methanobacterium sp. MB1 RepID=U6EEP9_9EURY
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:CDG65524.1}; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
L3_079_029G1_scaffold_62_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

2566..2964
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J2T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43227.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_079_029G1_scaffold_62_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

2961..3263
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43229.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_079_029G1_scaffold_62_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3491..4342)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RIC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68334.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_029G1_scaffold_62_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4339..4800)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QZE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK68335.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_029G1_scaffold_62_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4892..5989)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DIL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81317.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_079_029G1_scaffold_62_9
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6034..6459)
DNA (426bp) protein (142aa)
T/G mismatch-specific endonuclease (EC:3.1.-.-)
DNA mismatch endonuclease Vsr n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YXS0_9FIRM
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EPD62567.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_079_029G1_scaffold_62_10
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6476..9592)
DNA (3117bp) protein (1039aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KDK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44539.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L3_079_029G1_scaffold_62_11
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9734..12094)
DNA (2361bp) protein (787aa)
cytosine-specific methyltransferase (EC:2.1.1.37)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KE68_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EOS44541.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L3_079_029G1_scaffold_62_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12203..12406)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM50785.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Predicted transcriptional regulator
L3_079_029G1_scaffold_62_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

12741..13019
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J2V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43257.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_079_029G1_scaffold_62_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

13029..13181
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43259.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L3_079_029G1_scaffold_62_15
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13747..14874
DNA (1128bp) protein (376aa)
DnaB domain protein helicase domain protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B3D261
Uncharacterized protein {ECO:0000313|EMBL:CCY66628.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_079_029G1_scaffold_62_16

Not on your lists

15045..15338
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TCK0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC65149.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_079_029G1_scaffold_62_17
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15307..16749
DNA (1443bp) protein (481aa)
relaxase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B53FC2
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:CCY66630.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_079_029G1_scaffold_62_18
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

16763..17689
DNA (927bp) protein (309aa)
plasmid stablization protein ParB n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B34A3C
ParB-like protein {ECO:0000313|EMBL:CDC72583.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_079_029G1_scaffold_62_19
unknown

Not on your lists

17704..18114
DNA (411bp) protein (137aa)

This feature has no annotations

L3_079_029G1_scaffold_62_20
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

18107..18337
DNA (231bp) protein (77aa)
DNA-binding protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B6B2AA
Uncharacterized protein {ECO:0000313|EMBL:CDC76969.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_079_029G1_scaffold_62_21
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

18449..19642
DNA (1194bp) protein (398aa)
integrase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B47423
Site-specific recombinase XerD {ECO:0000313|EMBL:CCX39675.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Site-specific recombinase XerD
L3_079_029G1_scaffold_62_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19932..20288)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=8 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXC2_9FIRM
Transposase {ECO:0000313|EMBL:KJF38128.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transposase IS4 family protein
L3_079_029G1_scaffold_62_23
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20947..21933)
DNA (987bp) protein (329aa)
Transcriptional regulator, LacI family n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q8A5_CALH1
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADQ07952.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
L3_079_029G1_scaffold_62_24
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21963..22625)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Streptococcus merionis RepID=UPI000371E55C
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
L3_079_029G1_scaffold_62_25
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

22891..23895
DNA (1005bp) protein (335aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2P6_ANATU
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAJ62852.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
L3_079_029G1_scaffold_62_26
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23966..24661)
DNA (696bp) protein (232aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWB3_9CLOT
hypothetical protein
L3_079_029G1_scaffold_62_27
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24658..25356)
DNA (699bp) protein (233aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037135C7
Tax=BJP_IG2069_Clostridiales_48_15
L3_079_029G1_scaffold_62_28
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25576..27840
DNA (2265bp) protein (755aa)
maltose phosphorylase n=1 Tax=Bacillus coahuilensis RepID=UPI00018509AC
maltose phosphorylase
Maltose phosphorylase {ECO:0000313|EMBL:KIC05017.1}; TaxID=1402208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis DPC 6832.;"
L3_079_029G1_scaffold_62_29
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28056..29414
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E01591
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL22861.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_079_029G1_scaffold_62_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29501..30373
DNA (873bp) protein (291aa)
ABC-type sugar transport systems, permease components n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LQ04_9FIRM
ABC-type sugar transport systems, permease components
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:CBL22862.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Displaying items 1-30 of 127 in total

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