ggKbase home page

L3_079_029G1_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_134_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(799..2376)
DNA (1578bp) protein (526aa)
Arylsulfatase {ECO:0000313|EMBL:EEY81856.1}; EC=3.1.6.- {ECO:0000313|EMBL:EEY81856.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Arylsulfatase n=3 Tax=Bacteroidales RepID=D0TIA2_9BACE
exported sulfatase
L3_079_029G1_scaffold_134_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2494..3966)
DNA (1473bp) protein (491aa)
Tat pathway signal sequence domain protein n=2 Tax=Parabacteroides RepID=E1YRJ9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25757.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_029G1_scaffold_134_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4075..4935)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD n=19 Tax=Bacteroidales RepID=A6L8X9_PARD8
RNA polymerase sigma factor rpoD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:KKB59733.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
L3_079_029G1_scaffold_134_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5075..6598)
DNA (1524bp) protein (508aa)
Peptidase Do family protein {ECO:0000313|EMBL:KDS51882.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDS51882.1};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Peptidase Do n=2 Tax=Parabacteroides RepID=E1YRJ7_9PORP
serine protease
L3_079_029G1_scaffold_134_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7389..8759
DNA (1371bp) protein (457aa)
YihY family protein n=2 Tax=Parabacteroides RepID=E1YRJ6_9PORP
YihY family inner membrane domain protein {ECO:0000313|EMBL:KDS51870.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
ribonuclease BN
L3_079_029G1_scaffold_134_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8785..10140
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Parabacteroides sp. 20_3 RepID=E1YRJ5_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EFK64002.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
MATE efflux family protein
L3_079_029G1_scaffold_134_7
unknown

Not on your lists

comp(10151..10378)
DNA (228bp) protein (76aa)
id=1897264 bin=GWE2_Bacteroidetes_29_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
L3_079_029G1_scaffold_134_8
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10458..10775)
DNA (318bp) protein (106aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L8X4_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN26165.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_079_029G1_scaffold_134_9
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10789..11703)
DNA (915bp) protein (305aa)
Putative chaperone protein DnaJ n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIB0_9BACE
Putative chaperone protein DnaJ {ECO:0000313|EMBL:EEY81864.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
chaperone DnAJ
L3_079_029G1_scaffold_134_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11905..12507)
DNA (603bp) protein (201aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Parabacteroides sp. D13 RepID=C7XES0_9PORP
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EFI07515.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_079_029G1_scaffold_134_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12836..13885
DNA (1050bp) protein (350aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein n=2 Tax=Parabacteroides RepID=E1YRJ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25749.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
choloylglycine hydrolase
L3_079_029G1_scaffold_134_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13896..16253)
DNA (2358bp) protein (786aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides RepID=E1YRI9_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFK63996.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ABC transporter permease
L3_079_029G1_scaffold_134_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16275..18602)
DNA (2328bp) protein (776aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides RepID=E1YRI8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25747.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ABC transporter permease
L3_079_029G1_scaffold_134_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18634..21009)
DNA (2376bp) protein (792aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides RepID=E1YRI7_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFK63994.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ABC transporter permease
L3_079_029G1_scaffold_134_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21022..22272)
DNA (1251bp) protein (417aa)
Efflux transporter, MFP component, RND family n=8 Tax=Bacteroidales RepID=A6L8W7_PARD8
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFK63993.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_079_029G1_scaffold_134_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22320..23654)
DNA (1335bp) protein (445aa)
Outer membrane efflux protein n=3 Tax=Bacteroidales RepID=D0TIB7_9BACE
Outer membrane efflux family protein {ECO:0000313|EMBL:KDS59602.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
outer membrane efflux protein
L3_079_029G1_scaffold_134_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23890..24159
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XES7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49562.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_029G1_scaffold_134_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24295..25035)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YRI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63991.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_079_029G1_scaffold_134_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25070..26089)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YRI3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25742.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_029G1_scaffold_134_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26203..27291)
DNA (1089bp) protein (363aa)
Acyltransferase n=4 Tax=Parabacteroides RepID=E1YRI2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25741.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
transmembrane acyltransferase
L3_079_029G1_scaffold_134_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27476..28012
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YRI1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25740.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_029G1_scaffold_134_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28007..28912)
DNA (906bp) protein (302aa)
Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6L8W1_PARD8
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS51867.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
transcriptional regulator
L3_079_029G1_scaffold_134_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29224..29826
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=3 Tax=Parabacteroides RepID=E1YRH9_9PORP
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFK63986.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_079_029G1_scaffold_134_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29884..31260
DNA (1377bp) protein (459aa)
Outer membrane efflux protein n=2 Tax=Parabacteroides RepID=E1YRH8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25737.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
outer membrane efflux protein
L3_079_029G1_scaffold_134_25
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31307..32332
DNA (1026bp) protein (342aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroidales RepID=D0TIC5_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEY81879.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
membrane fusion protein transporter
L3_079_029G1_scaffold_134_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32339..35458
DNA (3120bp) protein (1040aa)
Heavy metal efflux pump, CzcA family n=6 Tax=Bacteroidales RepID=C7XE69_9PORP
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EEY81880.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
putative transmembrane Acr-type transport protein
L3_079_029G1_scaffold_134_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35629..35922
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YRH5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63982.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_079_029G1_scaffold_134_28
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35959..37182
DNA (1224bp) protein (408aa)
Oxidoreductase, FAD/FMN-binding protein n=7 Tax=Bacteroidales RepID=C7XE71_9PORP
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EFK63981.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
NADH:flavin oxidoreductase
L3_079_029G1_scaffold_134_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37182..37973
DNA (792bp) protein (264aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=6 Tax=Parabacteroides RepID=C7XE72_9PORP
short-chain dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEU49636.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_029G1_scaffold_134_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


38110..38694
DNA (585bp) protein (195aa)
50S ribosomal protein L25 n=9 Tax=Bacteroidales RepID=RL25_PARD8
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Displaying items 1-30 of 69 in total

View Taxonomy