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L3_079_029G1_scaffold_140

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Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_140_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2..592
DNA (591bp) protein (197aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB07_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71715.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_029G1_scaffold_140_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

763..1089
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB08_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71716.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_029G1_scaffold_140_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1089..1256
DNA (168bp) protein (56aa)
XkdX family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EB09_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71717.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical phage protein
L3_079_029G1_scaffold_140_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1277..1690
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E771_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71718.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_029G1_scaffold_140_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1701..2006
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E770_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40579.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_029G1_scaffold_140_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2006..3070
DNA (1065bp) protein (355aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E769_9ACTN
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EBA40578.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Lysin, N-acetylmuramoyl-L-alanine amidase
L3_079_029G1_scaffold_140_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3375..6098
DNA (2724bp) protein (908aa)
E1-E2 ATPase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGX3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73078.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
P-type HAD superfamily ATPase
L3_079_029G1_scaffold_140_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6202..7344
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z825_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73077.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_029G1_scaffold_140_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7452..7994
DNA (543bp) protein (181aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=2 Tax=Collinsella RepID=A4ECF9_9ACTN
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EBA38690.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_079_029G1_scaffold_140_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8006..9310
DNA (1305bp) protein (435aa)
Tetratricopeptide repeat protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN95_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73075.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_029G1_scaffold_140_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9426..10469
DNA (1044bp) protein (348aa)
Cell shape determining protein MreB/Mrl family n=2 Tax=Collinsella RepID=R5ZAG6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73074.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
rod shape-determining protein MreB
L3_079_029G1_scaffold_140_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10548..11489
DNA (942bp) protein (314aa)
Cell shape-determining protein MreC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG2_9ACTN
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rod shape-determining protein MreC
L3_079_029G1_scaffold_140_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11501..12067
DNA (567bp) protein (189aa)
Putative rod shape-determining protein MreD n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z820_9ACTN
Putative rod shape-determining protein MreD {ECO:0000313|EMBL:CDA35833.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rod shape-determining protein MreD
L3_079_029G1_scaffold_140_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12081..14150
DNA (2070bp) protein (690aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3W4_9ACTN
Penicillin-binding protein 2 {ECO:0000313|EMBL:CDA35832.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_029G1_scaffold_140_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14160..15386
DNA (1227bp) protein (409aa)
Cell cycle protein FtsW/RodA/SpoVE family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN90_9ACTN
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CDA35831.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cell elongation-specific peptidoglycan biosynthesis regulator RodA
L3_079_029G1_scaffold_140_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15405..16334
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38698.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_029G1_scaffold_140_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16345..18222
DNA (1878bp) protein (626aa)
Radical SAM domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGW5_9ACTN
Radical SAM domain protein {ECO:0000313|EMBL:CDA35829.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Radical SAM domain protein
L3_079_029G1_scaffold_140_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18219..19031
DNA (813bp) protein (271aa)
Radical SAM-linked protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECG9_9ACTN
Radical SAM-linked protein {ECO:0000313|EMBL:EBA38700.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_029G1_scaffold_140_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


19099..19473
DNA (375bp) protein (125aa)
50S ribosomal protein L21 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECH0_9ACTN
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LSU ribosomal protein L21P
L3_079_029G1_scaffold_140_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


19507..19764
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=2 Tax=Collinsella RepID=A4ECH1_9ACTN
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LSU ribosomal protein L27P
L3_079_029G1_scaffold_140_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19850..21316
DNA (1467bp) protein (489aa)
GTPase Obg n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAF7_9ACTN
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GTP-binding protein Obg/CgtA
L3_079_029G1_scaffold_140_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21320..21997
DNA (678bp) protein (226aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGW0_9ACTN
L3_079_029G1_scaffold_140_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22010..22618
DNA (609bp) protein (203aa)
Hydrolase HD family n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z808_9ACTN
Hydrolase HD family {ECO:0000313|EMBL:CDA35823.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
metal dependent phosphohydrolase
L3_079_029G1_scaffold_140_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22646..23101
DNA (456bp) protein (152aa)
Ribosomal silencing factor RsfS n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3V4_9ACTN
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
iojap family protein
L3_079_029G1_scaffold_140_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23197..24411)
DNA (1215bp) protein (405aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZN80_9ACTN
L3_079_029G1_scaffold_140_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


24652..24993
DNA (342bp) protein (114aa)
30S ribosomal protein S16 n=2 Tax=Collinsella RepID=R5ZAF1_9ACTN
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
SSU ribosomal protein S16P
L3_079_029G1_scaffold_140_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24997..25281
DNA (285bp) protein (95aa)
UPF0109 protein COLAER_02165 n=2 Tax=Collinsella RepID=A4ECI2_9ACTN
UPF0109 protein COLAER_02165 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
RNA-binding protein
L3_079_029G1_scaffold_140_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25394..25807
DNA (414bp) protein (138aa)
16S rRNA processing protein RimM n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z804_9ACTN
16S rRNA processing protein RimM {ECO:0000313|EMBL:CDA35818.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
16S rRNA processing protein RimM
L3_079_029G1_scaffold_140_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25818..26576
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECI4_9ACTN
L3_079_029G1_scaffold_140_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26579..27142
DNA (564bp) protein (188aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECI5_9ACTN
Displaying items 1-30 of 128 in total

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