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L3_079_029G1_scaffold_176

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_176_1
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..89)
DNA (87bp) protein (29aa)
50S ribosomal protein L3 n=1 Tax=Porphyromonas macacae RepID=UPI0003611614
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000313|EMBL:KGN72412.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
L3_079_029G1_scaffold_176_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(109..414)
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=9 Tax=Bacteroidales RepID=RS10_PARD8
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_029G1_scaffold_176_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(437..2563)
DNA (2127bp) protein (709aa)
Elongation factor G n=8 Tax=Bacteroidales RepID=EFG_PARD8
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
fusA; elongation factor G
L3_079_029G1_scaffold_176_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2587..3063)
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=9 Tax=Bacteroidales RepID=RS7_PARD8
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_079_029G1_scaffold_176_5
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3217..3627)
DNA (411bp) protein (137aa)
30S ribosomal protein S12 n=9 Tax=Bacteroidales RepID=RS12_PARD8
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_079_029G1_scaffold_176_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4094..4534)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A6L4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23649.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_029G1_scaffold_176_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4849..5403
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0J4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23648.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_029G1_scaffold_176_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5418..5678
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBH9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50179.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Predicted P-loop ATPase and inactivated derivatives
L3_079_029G1_scaffold_176_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6003..7850)
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=2 Tax=Parabacteroides RepID=E1Z0J6_9PORP
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
DNA mismatch repair protein mutL
L3_079_029G1_scaffold_176_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7850..8152)
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7XBH7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23645.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_029G1_scaffold_176_11
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8182..9783)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XBH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEY82713.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_079_029G1_scaffold_176_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9780..11141)
DNA (1362bp) protein (454aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
PPIC-type PPIASE domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBH5_9PORP
peptidyl-prolyl cis-trans isomerase
L3_079_029G1_scaffold_176_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11170..12024)
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0K0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60795.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_079_029G1_scaffold_176_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12038..13624)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B9K5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24723.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
parvulin-like peptidyl-prolyl isomerase
L3_079_029G1_scaffold_176_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13733..15208)
DNA (1476bp) protein (492aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Inosine-5'-monophosphate dehydrogenase n=9 Tax=Bacteroidales RepID=A6LEK4_PARD8
inosine-5'-monophosphate dehydrogenase
L3_079_029G1_scaffold_176_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15423..17603)
DNA (2181bp) protein (727aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EEY82718.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEY82718.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
ATP-dependent DNA helicase recQ n=9 Tax=Bacteroidales RepID=A6LEK5_PARD8
ATP-dependent DNA helicase recQ
L3_079_029G1_scaffold_176_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17636..18868)
DNA (1233bp) protein (411aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Parabacteroides RepID=E1Z0K4_9PORP
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L3_079_029G1_scaffold_176_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18890..19552)
DNA (663bp) protein (221aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ATP-dependent Clp protease proteolytic subunit n=9 Tax=Bacteroidales RepID=A6LEK7_PARD8
ATP-dependent Clp protease proteolytic subunit
L3_079_029G1_scaffold_176_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19742..21094)
DNA (1353bp) protein (451aa)
Trigger factor {ECO:0000313|EMBL:EFK60801.1}; EC=5.2.1.8 {ECO:0000313|EMBL:EFK60801.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
FKBP-type peptidyl-prolyl cis-transisomerase n=9 Tax=Bacteroidales RepID=A6LEK8_PARD8
FKBP-type peptidyl-prolyl cis-transisomerase
L3_079_029G1_scaffold_176_20
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21238..22125
DNA (888bp) protein (296aa)
CAAX amino terminal protease family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THW8_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEY82722.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
metal-dependent membrane protease
L3_079_029G1_scaffold_176_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22120..22872)
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=5 Tax=Bacteroidales RepID=A6LEL0_PARD8
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABR44124.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_079_029G1_scaffold_176_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22957..24072)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AM91_9PORP
Glycosyl hydrolases 43 family protein {ECO:0000313|EMBL:KDS42047.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
glycoside hydrolase family protein
L3_079_029G1_scaffold_176_23
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24269..24994
DNA (726bp) protein (242aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEL2_PARD8
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:EEY82725.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_079_029G1_scaffold_176_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24997..25767
DNA (771bp) protein (257aa)
ABC transporter ATP-binding protein n=7 Tax=Bacteroidales RepID=A6LEL3_PARD8
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK60806.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_079_029G1_scaffold_176_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25882..27168)
DNA (1287bp) protein (429aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
S-adenosylmethionine synthase n=5 Tax=Bacteroidales RepID=METK_PARD8
L3_079_029G1_scaffold_176_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27357..27527)
DNA (171bp) protein (57aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7XBG1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60808.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_079_029G1_scaffold_176_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27582..28040)
DNA (459bp) protein (153aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine n=3 Tax=Parabacteroides RepID=A6LEL5_PARD8
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine {ECO:0000313|EMBL:ABR44129.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_079_029G1_scaffold_176_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28051..29100)
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=9 Tax=Bacteroidales RepID=QUEA_PARD8
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L3_079_029G1_scaffold_176_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29113..29820)
DNA (708bp) protein (236aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
tRNA pseudouridine synthase B n=3 Tax=Bacteroidales RepID=D0THX7_9BACE
tRNA pseudouridine synthase B
L3_079_029G1_scaffold_176_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29824..30624)
DNA (801bp) protein (267aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Undecaprenyl-diphosphatase n=3 Tax=Bacteroidales RepID=D0THX8_9BACE
undecaprenol kinase
Displaying items 1-30 of 67 in total

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