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L3_079_029G1_scaffold_182

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Displaying items 1-30 of 102 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_182_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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167..1210
DNA (1044bp) protein (348aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroides fragilis RepID=I9AP74_BACFG
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EXZ26289.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
component of multidrug efflux system
L3_079_029G1_scaffold_182_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1207..4239
DNA (3033bp) protein (1011aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1GTZ8_BACFG
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:EXZ71057.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
putative transmembrane AcrB/D/F-family transporter
L3_079_029G1_scaffold_182_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4242..5531
DNA (1290bp) protein (430aa)
Outer membrane protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64MN0_BACFR
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:BAD51257.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_029G1_scaffold_182_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5574..6599
DNA (1026bp) protein (342aa)
Histidine kinase n=4 Tax=Bacteroides RepID=D1JW24_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY90030.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative two-component system sensor, no kinase domain
L3_079_029G1_scaffold_182_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6592..7365
DNA (774bp) protein (258aa)
Two-component system response regulator n=12 Tax=Bacteroides RepID=Q64MN2_BACFR
putative two-component response regulator
Response regulator {ECO:0000313|EMBL:EYE41487.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_079_029G1_scaffold_182_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7603..7914)
DNA (312bp) protein (104aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=I9AP80_BACFG
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86997.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_029G1_scaffold_182_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7918..8403)
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=4 Tax=Bacteroides RepID=E4W160_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90033.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative AsnC-family transcriptional regulatory protein
L3_079_029G1_scaffold_182_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8449..8538)
DNA (90bp) protein (30aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=I0PYP4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41211.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_079_029G1_scaffold_182_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8575..8829)
DNA (255bp) protein (85aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Bacteroides RepID=Q5L7H6_BACFN
putative isomerase
L3_079_029G1_scaffold_182_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8960..9397)
DNA (438bp) protein (146aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Peptidyl-prolyl cis-trans isomerase n=6 Tax=Bacteroides RepID=Q5L7H6_BACFN
putative isomerase
L3_079_029G1_scaffold_182_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9418..10002)
DNA (585bp) protein (195aa)
fklB; putative FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
Peptidyl-prolyl cis-trans isomerase n=12 Tax=Bacteroides RepID=E1WSG3_BACF6
L3_079_029G1_scaffold_182_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10469..11179
DNA (711bp) protein (237aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
NAD-dependent protein deacylase n=11 Tax=Bacteroides RepID=E1WSG2_BACF6
cobB; putative nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase
L3_079_029G1_scaffold_182_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11113..11886)
DNA (774bp) protein (258aa)
Putative glycosyltransferase n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5L7H9_BACFN
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:CAH09973.1}; TaxID=272559 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC; 9343).;"
L3_079_029G1_scaffold_182_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11879..13144)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I3HPY1_BACFG
putative glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EIY90039.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_029G1_scaffold_182_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13249..14451
DNA (1203bp) protein (401aa)
UDP-N-acetyl-D-mannosamine dehydrogenase n=12 Tax=Bacteroides RepID=Q64MP0_BACFR
putative UDP-N-acetyl-D-mannosamine dehydrogenase
Nucleotide sugar dehydrogenase family protein {ECO:0000313|EMBL:EYA16954.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_079_029G1_scaffold_182_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14506..15636
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EYB07332.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EYB07332.1};; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
UDP-N-acetylglucosamine 2-epimerase n=8 Tax=Bacteroides RepID=E1WSF8_BACF6
putative UDP-N-acetylglucosamine 2-epimerase
L3_079_029G1_scaffold_182_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15688..16335)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HPY4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90042.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative transmembrane protein
L3_079_029G1_scaffold_182_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16404..17603)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=K1GU13_BACFG
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAD51244.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_029G1_scaffold_182_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17603..18613)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IAU9_9BACE
putative exopolysaccharide biosynthesis protein
Putative glycosyltransferase {ECO:0000313|EMBL:EXY29135.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
L3_079_029G1_scaffold_182_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18623..19810)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6IAV0_9BACE
putative glycosyltransferase
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXY67985.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_079_029G1_scaffold_182_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19814..21334)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6IAV1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY90046.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative O-antigen repeat unit transporter
L3_079_029G1_scaffold_182_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21350..23389)
DNA (2040bp) protein (680aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
Methionine--tRNA ligase n=8 Tax=Bacteroides RepID=SYM_BACFR
metG; putative methionyl-tRNA synthetase
L3_079_029G1_scaffold_182_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23553..24641)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q64MP9_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD51238.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_029G1_scaffold_182_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24658..25011)
DNA (354bp) protein (118aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64MQ0_BACFR
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CBW24863.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_029G1_scaffold_182_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25086..26021
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HPZ2_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90050.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative transmembrane anchored hypothetical protein
L3_079_029G1_scaffold_182_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26875..28269
DNA (1395bp) protein (465aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=Q5L7J2_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ51554.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_029G1_scaffold_182_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28450..30519
DNA (2070bp) protein (690aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HPZ5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY90053.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative CoA-binding protein
L3_079_029G1_scaffold_182_28
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30619..31107
DNA (489bp) protein (163aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=Q5L7J4_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD39564.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_029G1_scaffold_182_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31097..32182
DNA (1086bp) protein (362aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=5 Tax=Bacteroides fragilis RepID=I9AXZ5_BACFG
putative radical SAM-family protein
Putative heme biosynthesis protein {ECO:0000313|EMBL:BAD51229.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_029G1_scaffold_182_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32284..36273
DNA (3990bp) protein (1330aa)
Two-component system sensor histidine kinase/response regulator hybrid n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64MQ9_BACFR
Two-component system sensor histidine kinase/response regulator hybrid {ECO:0000313|EMBL:BAD51228.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
two-component system sensor histidine kinase/response regulator hybrid
Displaying items 1-30 of 102 in total

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