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L3_079_029G1_scaffold_344

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_344_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1067
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii AMC35 RepID=K1JAA8_9GAMM
Alcohol dehydrogenase {ECO:0000313|EMBL:KGG80202.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
adh; alcohol dehydrogenase
L3_079_029G1_scaffold_344_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2028..4637
DNA (2610bp) protein (870aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EDS12797.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EDS12797.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ATPase P (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6H2_9FIRM
L3_079_029G1_scaffold_344_3
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4673..4936
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T1D9_SYNGF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY56280.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_079_029G1_scaffold_344_4
unknown

Not on your lists

comp(5111..5287)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_079_029G1_scaffold_344_5
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5590..6441
DNA (852bp) protein (284aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZYU3_9PORP
pyridoxal kinase
L3_079_029G1_scaffold_344_6
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6556..6948
DNA (393bp) protein (131aa)
Zn-finger containing protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04899.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_079_029G1_scaffold_344_7
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6962..7453
DNA (492bp) protein (164aa)
Metal-dependent phosphohydrolase HD sub domain n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKQ3_CELLD
metal-dependent phosphohydrolase HD sub domain
Metal-dependent phosphohydrolase HD sub domain {ECO:0000313|EMBL:ADZ83306.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_079_029G1_scaffold_344_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7555..8586
DNA (1032bp) protein (344aa)
Capsular polysaccharide biosynthesis protein CapD n=1 Tax=Clostridium colicanis 209318 RepID=N9Y4P2_9CLOT
Capsular polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:ENZ03139.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
polysaccharide biosynthesis protein CapD
L3_079_029G1_scaffold_344_9
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8795..9595
DNA (801bp) protein (267aa)
Transcriptional regulator n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQY1_EUBLK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADO39423.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_079_029G1_scaffold_344_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9592..10407
DNA (816bp) protein (272aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase {ECO:0000313|EMBL:ADZ85643.1}; EC=3.6.3.25 {ECO:0000313|EMBL:ADZ85643.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Sulfate-transporting ATPase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKC8_CELLD
L3_079_029G1_scaffold_344_11
Eggerthia catenaformis, Eggerthia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10404..11126
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2PNE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMD17109.1}; TaxID=999415 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Eggerthia.;" source="Eggerthia catenaformis OT 569 = DSM 20559.;"
ABC transporter
L3_079_029G1_scaffold_344_12
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(11163..11801)
DNA (639bp) protein (213aa)
precorrin-8X methylmutase (EC:5.4.1.2)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BS94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA63839.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L3_079_029G1_scaffold_344_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11809..12333)
DNA (525bp) protein (175aa)
Cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PB84_9FIRM
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EDS11414.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_079_029G1_scaffold_344_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12330..13826)
DNA (1497bp) protein (499aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSM3_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L3_079_029G1_scaffold_344_15
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13829..14905)
DNA (1077bp) protein (359aa)
Histidinol-phosphate transaminase n=1 Tax=Clostridium sp. ASF356 RepID=N1ZNG4_9CLOT
Histidinol-phosphate transaminase {ECO:0000313|EMBL:EMZ15548.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
threonine-phosphate decarboxylase
L3_079_029G1_scaffold_344_16
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14923..15903)
DNA (981bp) protein (327aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium sp. CAG:221 RepID=R6FVW6_9CLOT
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
Adenosylcobinamide-phosphate synthase
L3_079_029G1_scaffold_344_17
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15927..16316)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YME4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65526.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_079_029G1_scaffold_344_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16317..17096)
DNA (780bp) protein (260aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Clostridium sp. D5 RepID=F0YXC6_9CLOT
L3_079_029G1_scaffold_344_19
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17093..17626)
DNA (534bp) protein (178aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
Uncharacterized protein n=2 Tax=Eubacterium sp. 14-2 RepID=S0J970_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24308.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L3_079_029G1_scaffold_344_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17660..18721)
DNA (1062bp) protein (354aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FVX1_9CLOT
L3_079_029G1_scaffold_344_21
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18735..20111)
DNA (1377bp) protein (459aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)/cobyrinate a,c-diamide synthase (EC:6.3.5.9 6.3.5.-)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Blautia sp. CAG:257 RepID=R5WUS5_9FIRM
L3_079_029G1_scaffold_344_22
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20123..21343)
DNA (1221bp) protein (407aa)
Putative precorrin-6x reductase CbiJ/CobK n=1 Tax=Roseburia sp. CAG:471 RepID=R7EGF6_9FIRM
Putative precorrin-6x reductase CbiJ/CobK {ECO:0000313|EMBL:CDE01363.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
precorrin-6x reductase
L3_079_029G1_scaffold_344_23
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(21368..22651)
DNA (1284bp) protein (428aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BHJ3_9FIRM
glutamate-1-semialdehyde aminotransferase
L3_079_029G1_scaffold_344_24
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22651..23634)
DNA (984bp) protein (328aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DBL2_9FIRM
L3_079_029G1_scaffold_344_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23636..25138)
DNA (1503bp) protein (501aa)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LHG1_9FIRM
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EOS58214.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
uroporphyrin-III C-methyltransferase
L3_079_029G1_scaffold_344_26
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25143..26027)
DNA (885bp) protein (295aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Porphobilinogen deaminase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSC4_CLOPH
L3_079_029G1_scaffold_344_27
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26020..27273)
DNA (1254bp) protein (418aa)
cobalt-precorrin-6A reductase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FE6D06
precorrin-6x reductase
Precorrin-6x reductase {ECO:0000313|EMBL:AHF11131.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_079_029G1_scaffold_344_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27594..28319)
DNA (726bp) protein (242aa)
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:EEX21470.1}; EC=2.1.1.131 {ECO:0000313|EMBL:EEX21470.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Precorrin-3B C(17)-methyltransferase n=3 Tax=Lachnospiraceae RepID=C9L8S1_BLAHA
precorrin-3B C(17)-methyltransferase
L3_079_029G1_scaffold_344_29
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28330..29607)
DNA (1278bp) protein (426aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase 1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=HEM11_CLOPH
L3_079_029G1_scaffold_344_30
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29564..30595)
DNA (1032bp) protein (344aa)
Putative cobalamin biosynthesis protein CbiG n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L9S7_9FIRM
Putative cobalamin biosynthesis protein CbiG {ECO:0000313|EMBL:EET62334.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
cobalamin (vitamin B12) biosynthesis protein CbiG
Displaying items 1-30 of 40 in total

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