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L3_079_029G1_scaffold_349

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_029G1_scaffold_349_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(218..1192)
DNA (975bp) protein (325aa)
Polyprenyl synthetase n=3 Tax=Parabacteroides RepID=A7AJL4_9PORP
Polyprenyl synthetase {ECO:0000313|EMBL:EDN85005.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
polyprenyl synthetase
L3_079_029G1_scaffold_349_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1292..4114
DNA (2823bp) protein (941aa)
DNA-directed DNA polymerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X694_9PORP
DNA-directed DNA polymerase {ECO:0000313|EMBL:CDD14659.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase I
L3_079_029G1_scaffold_349_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4449..5120
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AJL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85008.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_079_029G1_scaffold_349_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5265..6368
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEB9_9PORP
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ychF; GTP-dependent nucleic acid-binding protein EngD
L3_079_029G1_scaffold_349_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6390..7805
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8E1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14662.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_349_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8213..9136
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZN05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12665.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Tol biopolymer transport system periplasmic protein
L3_079_029G1_scaffold_349_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9521..10663)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AJM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85016.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_349_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10688..11806)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B1Z5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14666.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
transcriptional regulator
L3_079_029G1_scaffold_349_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12030..12965
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AJM8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85019.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_349_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13403..14983)
DNA (1581bp) protein (527aa)
Putative glutamate/gamma-aminobutyrate antiporter n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTL3_9PORP
Putative glutamate/gamma-aminobutyrate antiporter {ECO:0000313|EMBL:CDD14668.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glutamate/gamma-aminobutyrate anti-porter
L3_079_029G1_scaffold_349_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15193..15966
DNA (774bp) protein (258aa)
Ion channel n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6A6_9PORP
Ion channel {ECO:0000313|EMBL:CDD14669.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
potassium channel subunit
L3_079_029G1_scaffold_349_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16353..17324)
DNA (972bp) protein (324aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glutaminase n=2 Tax=Parabacteroides merdae RepID=A7AJN2_9PORP
glsA; putative glutaminase
L3_079_029G1_scaffold_349_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17321..18760)
DNA (1440bp) protein (480aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glutamate decarboxylase n=3 Tax=Parabacteroides merdae RepID=A7AJN3_9PORP
glutamate decarboxylase
L3_079_029G1_scaffold_349_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18950..20182
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BEJ3_9PORP
Transporter major facilitator family protein {ECO:0000313|EMBL:CDD14672.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
sugar transporter
L3_079_029G1_scaffold_349_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20201..21103
DNA (903bp) protein (301aa)
Putative membrane protein n=2 Tax=Parabacteroides RepID=A7AJN5_9PORP
Putative membrane protein {ECO:0000313|EMBL:EDN85026.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative permease
L3_079_029G1_scaffold_349_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21225..21677
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AJN6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85027.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_029G1_scaffold_349_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21667..22185
DNA (519bp) protein (173aa)
Sigma-70 region 2 n=2 Tax=Parabacteroides merdae RepID=A7AJN7_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EDN85028.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase ECF-type sigma factor
L3_079_029G1_scaffold_349_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22169..22576
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XED1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14676.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_349_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22581..23075
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8F4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14677.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_349_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23490..26600
DNA (3111bp) protein (1037aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides merdae RepID=A7AJP0_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDN85031.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
TonB-dependent receptor plug
L3_079_029G1_scaffold_349_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26636..28162
DNA (1527bp) protein (509aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A4Z1_9PORP
SusD family protein {ECO:0000313|EMBL:CDD14679.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RagB/SusD domain-containing protein
L3_079_029G1_scaffold_349_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28223..31336
DNA (3114bp) protein (1038aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZE7_9PORP
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDD14680.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_029G1_scaffold_349_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31406..34201
DNA (2796bp) protein (932aa)
Alpha-L-rhamnosidase N-terminal domain protein n=3 Tax=Parabacteroides merdae RepID=A7AJP3_9PORP
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EDN85034.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alpha-L-rhamnosidase
L3_079_029G1_scaffold_349_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34213..35643
DNA (1431bp) protein (477aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8G0_9PORP
L-arabinose isomerase
L3_079_029G1_scaffold_349_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35867..38506)
DNA (2640bp) protein (880aa)
DNA mismatch repair protein MutS n=3 Tax=Parabacteroides merdae RepID=K6BDZ7_9PORP
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00039014}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
DNA mismatch repair protein MutS
L3_079_029G1_scaffold_349_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38641..40092
DNA (1452bp) protein (484aa)
Arylsulfatase n=4 Tax=Parabacteroides RepID=A7AGW1_9PORP
Arylsulfatase {ECO:0000313|EMBL:EDN85578.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative exported sulfatase
Displaying 26 items

View Taxonomy